Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral819g00005 ATGGGTTGTATGTGCTCGAAACCGAAATCTTCAAATGATTACGTTGCTGAGAACCTGGCCAGAGACAAGGATACGAAGGCAAATAGAATCTCAAAACATTTGACTTTGGGAGAGAAGGTCGCAATAGAGGCTGATGGTAGTGGTAATGATGCGACTACACGGTTGATATCTAATCCGTCTCGGGATGGAACTTCAGGGTCCGCTTCCGTGTCATCAGATGAGGGGGAGAAGAGCGGAGAACCAGAAACTACCGCAAAGCCGGCAAAACAGCTGGTTCATATGGCCTCAAACATGGGAATTGGAAATGGAGGACAAGGACAACCTAAGATGGCTAGGATAGTTACCGTACCTAAAGGGGAAAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCAGGGGAAGCCATTAATGGTTGGATACCTCGCAGAGCAGACTCATATGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTTTACCGAGCTCGTGATCTAGAAACAAACAAAATTGTTGCGTTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATCATTGTACTGCGAAGGCTTGATCATCCAAATGTCATGAAACTTGACGGCATCATTACTTCACGGGTCTCCGGTAGCTTGTATCTTGTTTTCGAATATATGGAGCATGATCTTGCGGGGCTTGCAGCAACACCTGGCATCAAGTTCACTGAAGGGCAGATCAAATGTTATATGCAACAGTTGCTTCGTGGTATTGAGCATTGCCACAGTCATGGTGTTCTACATCGAGACATCAAGGGCTCAAATCTTCTGATTGACAAGAATGGCAATCTAAAGATTGGTGATTTTGGGCTAGCAACTTTCTTTGAGCCTTCTAAGGCTCAGGTTTTGACAAGTCGTGTGGTAACCTTGTGGTACCGACCACCTGAACTCCTACTGGGAGCCACAAATTATGGAGTTGCAGTGGACTTGTGGAGTGCTGGTTGCATTCTTGCGGAGTTGTTTGCTGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCACAAAATCTTTAAACTCTGTGGATCACCATCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAACCTCAACATCCCTACAAACGTGTTGTTGCTGAGACATTTAAGGATTTTCCTCCATCAGCATTAAGCCTTTTGGAAGTCCTCCTTGCTATTGAACCTGACGATCGAGGAACTGCTTCTTTAGCACTTCACAGCGAGTTCTTTACCACAAAGCCTCTTCCATGTGATCCTTCTACTTTGCCAAGATATCCACCAAGCAAGGAGTTTGATGTCAAGTTTCGACAAGAAGAAGCCAGAAGACGAAGAGCTGCAAATAATAAAGGAAATGCAGAGGAATTCTCTAGCAAGGTTTCCAAAGATTCTAAAGCTGTTCCAGCACCTGATGCTAAGGCTGAGTTACGGTCATCAATTGAGAAAAGACAAGGACAAGCTAACCCTAAATGTATTAGCGAGAAGTTCAATCCTGATGAGGATGGTGGTTCTGGCTTCCCTATTGAACCTTCAAAGACACGAGCACTCAATGCCTTCTCTCATTCTGGAATGCTGCTCAATTGTCGAGGTTTTCTAATTCAGTTGCCAATGGAGGTGGTTTAA 1698 0.4464 MGCMCSKPKSSNDYVAENLARDKDTKANRISKHLTLGEKVAIEADGSGNDATTRLISNPSRDGTSGSASVSSDEGEKSGEPETTAKPAKQLVHMASNMGIGNGGQGQPKMARIVTVPKGERGAQVLAGWPSWLTAVAGEAINGWIPRRADSYEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMKLDGIITSRVSGSLYLVFEYMEHDLAGLAATPGIKFTEGQIKCYMQQLLRGIEHCHSHGVLHRDIKGSNLLIDKNGNLKIGDFGLATFFEPSKAQVLTSRVVTLWYRPPELLLGATNYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEVLLAIEPDDRGTASLALHSEFFTTKPLPCDPSTLPRYPPSKEFDVKFRQEEARRRRAANNKGNAEEFSSKVSKDSKAVPAPDAKAELRSSIEKRQGQANPKCISEKFNPDEDGGSGFPIEPSKTRALNAFSHSGMLLNCRGFLIQLPMEVV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral819g00005 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Pral819g00005 565 Gene3D Transferase(Phosphotransferase) domain 1 240 476 - -
Pral819g00005 565 FunFam probable serine/threonine-protein kinase At1g54610 235 476 - -
Pral819g00005 565 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Pral819g00005 565 MobiDBLite consensus disorder prediction 50 74 - -
Pral819g00005 565 PANTHER CELL DIVISION PROTEIN KINASE 150 442 - -
Pral819g00005 565 MobiDBLite consensus disorder prediction 465 505 - -
Pral819g00005 565 SUPERFAMILY Protein kinase-like (PK-like) 145 444 IPR011009 -
Pral819g00005 565 CDD STKc_CDK9_like 152 436 - -
Pral819g00005 565 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Pral819g00005 565 MobiDBLite consensus disorder prediction 42 88 - -
Pral819g00005 565 ProSiteProfiles Protein kinase domain profile. 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral819g00005 565 SMART serkin_6 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral819g00005 565 FunFam probable serine/threonine-protein kinase At1g54610 139 234 - -
Pral819g00005 565 MobiDBLite consensus disorder prediction 465 534 - -
Pral819g00005 565 Pfam Protein kinase domain 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral819g00005 Pral-Chr819 27125 32152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral819g00005 144 472 Core Cell Cycle Gene Families AT5G10270 52.450 4.12e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral819g00005 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral819g00005 - - qsa:O6P43_031464 837.41