LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral813g00010	ATGGAGAGGTACAGGTTAATCAAGGAGGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTATAAATCTGAGAGAGGTCAAGTCGTTGAGGAAAATGAACCACCCTAATATTGTGAAACTGAAGGAAGTTATTCGAGAATGTGACATTCTATACTTTGTTTTCGAGTACATGGAATACAACCTGTACCAGCTCATGAAAGACAGGTCAAAGCTGTTTTCTGAAGGCCAAGTTAGAAATTGGTGTTTTCAAATTTTTCAGAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGCGACCTGAAGCCAGAAAACTTGCTGGTTACCAAGGATGCTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAGATCAGTTCACAACCACCCTATACTGAATATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGCTGCTTCAGTCTTATCTCTATGGTCCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCGCTTTTTCCTGGTGCCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATTGGCAGTCCCACCGTGGAGTCATGGGCTGGTGGTCTTAAACTTGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTTCATCTTTCTGTTCTAATCCCCTCTGCAAGTGCTGATGCTATCGACCTTATGACAGCACTTTGCTCATGGGATCCCAGCAAGAGGCCGACAGCTGCTGAGGCCCTTCAGCACCCATTCTTCCAGAGTTGCTTTTATATTCCTCCTTCCCTCCGCACCAAAGCAATAGCCAGAACTCCTCCATCCGCTGGGGTGCGGGGATCGGGGGATCGCCATGGGGCTAAGAGATATTCAGGTGCTTTGTCTAATTCGAAGCTAACCAATAATTATCCTCCCACTAAATTGCAACCTCCTTTTGCTCCAGGTGTACAACGCAAACTGGATTTGACAAATGAGGATGGAAATAAAACTGATAAAGCCTTGAAGACTGTCAAACAACCAAAGTATAGGCCTCCCGGAAAGAACAGCCCAACATCGATGAACAAGGGAAGAACAGTACGTGGGGTTGCAGAGACAGCTGAGAAGTTGGCTAATATGAGTGTTGGAATCCGAAAACAATCTATGGGAGAAGCTCGACCTCCTCCTCCAATGAAAGCTGGAGTCCAGTGGGGTTCTGAATCTAAGAACTTGCTGCCGAGGCCTGCTCAAGTGGTTTCTACTGGAAGAACTTTTCCTAGGAAAGTTGCCGGATGA	1359	0.4547	MERYRLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECINLREVKSLRKMNHPNIVKLKEVIRECDILYFVFEYMEYNLYQLMKDRSKLFSEGQVRNWCFQIFQSLAYMHQHGYFHRDLKPENLLVTKDAIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGPEVDMWAMGAIMAELFTLRPLFPGASEADEIYKICSVIGSPTVESWAGGLKLARDINYQFPQLAGVHLSVLIPSASADAIDLMTALCSWDPSKRPTAAEALQHPFFQSCFYIPPSLRTKAIARTPPSAGVRGSGDRHGAKRYSGALSNSKLTNNYPPTKLQPPFAPGVQRKLDLTNEDGNKTDKALKTVKQPKYRPPGKNSPTSMNKGRTVRGVAETAEKLANMSVGIRKQSMGEARPPPPMKAGVQWGSESKNLLPRPAQVVSTGRTFPRKVAG	452

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral813g00010	452	MobiDBLite	consensus disorder prediction	351	367	-	-
Pral813g00010	452	Pfam	Protein kinase domain	4	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral813g00010	452	MobiDBLite	consensus disorder prediction	408	452	-	-
Pral813g00010	452	ProSiteProfiles	Protein kinase domain profile.	4	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral813g00010	452	FunFam	serine/threonine-protein kinase MAK isoform X1	84	293	-	-
Pral813g00010	452	ProSitePatterns	Protein kinases ATP-binding region signature.	10	34	IPR017441	GO:0005524
Pral813g00010	452	SMART	serkin_6	4	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral813g00010	452	SUPERFAMILY	Protein kinase-like (PK-like)	1	287	IPR011009	-
Pral813g00010	452	Gene3D	Phosphorylase Kinase; domain 1	1	83	-	-
Pral813g00010	452	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	3	343	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral813g00010	Pral-Chr813	58723	65505	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral813g00010	1	290	Core Cell Cycle Gene Families	AT3G48750	37.919	9.19e-69	219

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_RCK	Pral813g00010		Pkinase	4e-74	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral813g00010	K08829		-	gmx:100810150	762.681

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