Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral813g00008 ATGGATAATAAACCAAAGTCCGATCAGGTCGTTCTCTTCATCGACCACCTCAACGCTAGCCCTCCTTCCGTGGAAACTCACCACAGCAACAATAACAACGACACCATCATCACCAACAGCAAGCCAGAGCTCACTTCTAGAGTTAAGACCTTCAATCGCCTCAGCTTTTCCAAACCCAAATCTCGCATCCAAGAATATGACCACCCACTCTACGCTAACTTCACTGTCCCCGAAGAAGCCCATGACGACGCCGCCCGGTATTCTTCCACCGACGACGAATGGGATGACGACGACGACGATGATGAAGAAGAAGATGAGGTCGGGGAGGACGGCCGCCCCAGGTCACACAAGAAAACCAAACGTCGTCGTCGGAAGATTCAATGGAAGCGCGTGCTGGAATGGGCCTTGTTCCTCATCATATTAACCAGCTTGGTCTCTAGCACCACCATTGCTTCCATTAAGACGAAGCATTTGTGGGGTTTGGAGATTTGGAAATGGTGCTTGATGGGGATGGTCACGTTCAGTGGAAGGTTAGTCTCCGGCTGGCTCGTGGCCGTCTCCGTGTTCATCATAGAACGGAACTTCATGCTCAGAGAAAAGGTGTTATACTTCATCTACGGTCTCAGAAAAAGCATCAGAAACTGCATATGGCTTGGCCTCGTGTTATTCTCGTACTGGACCGTCGTCTTCGACAACATCCAGAAAAAAAACCACAAGTTCCTCAACAAGGTGTTCCAGGCTCTGGTGGCCGTCCTCCTCGGAGCCGTAATCTGGCTCGTGAAGATCGTCCTGGTGAAACTTCTAGCCTCGTCGTTCCACGTCACGACCTACTTCGACAGAATGAAAGAGAGCGTGTTCCATCATTACATACTGGACACGCTCTCGGGGCCGCCATTGGAGGAGATCGAGGGAACGACGTCGCAGCATCTGACGGGGTCCAAGTCAATGCCGGCGAACTGGAAGGAAAGGAACAAGGCGATGAAGGAGGCAAAGAACTTGTACAAGTCGAAGAAGTTTGGGTCGAGGAAGATAGATATGGAGAAGCTGAGAGAACTAAGTATGGAGAGCACGGCGTCGGTGTGGAGCGTGAAAAGGCTGGTCAACTACGTGAGGTCGTCAGGGCTGTCCACGATTTCCCGGACCGTCGACGATTTCGGGAACTCCGAGTCGGAAATCTGCAGCGAGTGGGAAGCTAGGAATTGTGCCCAGAGGATTTTCAAGAACGTTGCTAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGAGTTGAGGTTCATACTATATTCCCGCTCTTCGAAGGCGCCCTTGAAACTGGAAAGATCTCCAGGTCCTCCTTTAGAAATTGGGTGATTCGAGCTTACTATGAAAGAAAGACTCTGGCACAATCACTGAACGACACCAAAACAGCAGTTCAACAGCTTCACAAACTAGCAAGTTCCATAGTGATAGTTGTAACGATCATAGTGTTCCTTTTGGTGATGGAGCTGGCTACCCTCAAAGTAATACTTTTCTTCATCACACAAATAGTTCTGGTTGGGGTTGCCTTCCAAGGCACTTGCAAAACTGTGCTGGAGGCCATCATCTTCGTCTTCATCATGCACCCTTTTGACATTGGAGATCGCTGTGTCATTGACGATGTTCACATGATTGTGGAGGAGATGAATATCTTGACGACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCAGTTTTGCTCAGCAAGCCCATAAGCAATTTCTATAGGAGTCCAGAAATGTGGGATTCTGTTGATTTCGTTATTGACGTTTCAACACCTATGGAGACCATCATTTCTCTCAAGAAATCAATTCAAACGTACATAGAGAGCAAGCCGAAGTACTGGAATCCAAAGCACGCGGTGATAGCGAAAGAGATAGAGAATGTGGATAAGCTGAAACTGTGTCTTTGTGTTCAGCACACGATCAACCATCAGAACTATGGGGAGAGAAACAATCGGATGACAGAGCTTTTGTTGGAGCTGAAGAAGATATTTGAGGTGCATGAAGTTAAGTACAATCTTCTTCCTCAGGAGGTTCACATCACCAAGATGAACAGTACCCAAAGTGGGAGGCCTGTGTTGTAA 2133 0.4791 MDNKPKSDQVVLFIDHLNASPPSVETHHSNNNNDTIITNSKPELTSRVKTFNRLSFSKPKSRIQEYDHPLYANFTVPEEAHDDAARYSSTDDEWDDDDDDDEEEDEVGEDGRPRSHKKTKRRRRKIQWKRVLEWALFLIILTSLVSSTTIASIKTKHLWGLEIWKWCLMGMVTFSGRLVSGWLVAVSVFIIERNFMLREKVLYFIYGLRKSIRNCIWLGLVLFSYWTVVFDNIQKKNHKFLNKVFQALVAVLLGAVIWLVKIVLVKLLASSFHVTTYFDRMKESVFHHYILDTLSGPPLEEIEGTTSQHLTGSKSMPANWKERNKAMKEAKNLYKSKKFGSRKIDMEKLRELSMESTASVWSVKRLVNYVRSSGLSTISRTVDDFGNSESEICSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKTLAQSLNDTKTAVQQLHKLASSIVIVVTIIVFLLVMELATLKVILFFITQIVLVGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLSKPISNFYRSPEMWDSVDFVIDVSTPMETIISLKKSIQTYIESKPKYWNPKHAVIAKEIENVDKLKLCLCVQHTINHQNYGERNNRMTELLLELKKIFEVHEVKYNLLPQEVHITKMNSTQSGRPVL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral813g00008 710 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 25 705 IPR016688 -
Pral813g00008 710 FunFam Predicted mechanosensitive ion channel 541 590 - -
Pral813g00008 710 Pfam Mechanosensitive ion channel 483 687 IPR006685 GO:0016020|GO:0055085
Pral813g00008 710 MobiDBLite consensus disorder prediction 89 108 - -
Pral813g00008 710 SUPERFAMILY Sm-like ribonucleoproteins 532 590 IPR010920 -
Pral813g00008 710 MobiDBLite consensus disorder prediction 85 119 - -
Pral813g00008 710 MobiDBLite consensus disorder prediction 22 41 - -
Pral813g00008 710 PIRSF Memb_At2g17000 13 708 IPR016688 -
Pral813g00008 710 MobiDBLite consensus disorder prediction 20 41 - -
Pral813g00008 710 Gene3D - 541 590 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral813g00008 Pral-Chr813 45279 51326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral813g00008 44 701 Mechanosensitive Ion Channel Family AT5G12080 45.214 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral813g00008 K22048 - gmx:100813521 1006.9