Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral802g00002 ATGACTCCCACACTTGATCTTGAATTTGATAATTTAGAAGAGGCATGGCAGTATTGGGTTGGCTATGGCAAAAGAATGGGATTTGGTGTTAGAAAGGAAAACTCCAATAAAAGCAAGAAAGATGGTTCTATCATATATTATAAATATGTTTGTCACAAGGAGGGAGTGAGAAAACCAGATAAAAGAGATTTCAAAATTAGGAAGCCTCGACAGGAAACAAGAACTGGGTGTGAAGTCAGAATGATAGTTAAAAAAGTGAATGGAAGATTTAGAGTTAGTGAACTTTATTTGGATCATAATCATCCTTTAGAGCCTCAAGAAACTGTTCACATGTTTGCATCACAGAGGAAATTACCAGAAGCACAAGGTTATGCTTTAGAAGCTGCTGAAGACGTCGGGATTAAGCAAAAAGCCTCTTTTAATTTAATGAGTAAATATGCAGGAGGGAGGGCTAATTTAGGATATACTGAAGAGGATATAAAGAGTTATCTAAGAGCAAGGAGACAACGAAAAATGTGCTATGGTGAAGCTGGGTGTCTACTTCGTTATTTCCAACATCAACTAACAGAAAATCCTTCATATTTTCATGCCTATCAAGTGGACTCAGAAGATCGAATAACTAATGTATTTTGGGCTGATCCACGTATGTTATTAGATTATGATTGTTTTGGGGATGTCATTTCATTTGATACAACATACTCCACCAATCGTGAAAATAGACCGCTTGCCATTTTCTCAGGTTTCAATTATTATAGAGAAGTAGTGATATTTGGTGCTGCGTTATTGTATGATGAGACCATTGAATCTTTTAAATGGCTTTTTGAAACTTTTCTACAAGCACATAAGGAAAAATTGCCATTTACTGTATTTACTGACCAAGATGCTGCAATGGCACGAGACTTGGAAGAAGTAATGCCAACCGTGAAGCATGGCTTGTGCACTTTTCATATTAATAGAAATGCGGTGAAACATCTTGGAAACTTGATGAAGGATGACTCTCATTTTTTGGGTAAGTTTAATTGGTGCATGTATCATTGTGAAGAAAAAATAGTGTTTGAGGAATCTTGGAAAGAATTATTGTTGAAGTACAATGCAGTAGATAATCCTTGGTTGATGTCCATTTATGAGTTGAAAGAAAAATGGGCAGCATGTTACATGAAGGATTCAAAGACTCTTGGTATGAGAAGCACACAGCTTAGTGAAAGTATTAATTCTTTCATAAAAAGTTGTACAAATCCTGAATTGAATATCAATCAATTCTTTGAAATCTTTGAACAGGTTGTTGTAGATAAACGATATAATGAATTAAAGAGTGATTTTAACTCACGGCAGAAGTTGCCGAGGTTGATTTTAAAGAGTTCATCTATGCTTCAACAGCTTTCTGAAATTTACACTCCACCAATTTTTGACTTGTTCCAGCAAGAGTATGACTTGCGTGATGCTACATGTATAAAAGAGAGCAAGGAAAGAAAGATAAATGAAGATGATGATGCCATTGTATTTGAATATGTAATCACAAGAGTTGATAAAAAAGGAGAGTGGAGATTGACATATGAGCCAGCAAGAGAAGACAAGGAGTCTAACATTACTTGTAGCTGTAAGAAGTTTGAACAATGGGGAATATTATGTTGTCATGCATTGAGGATATTGTATGATCGAGATGTAAAGTTACTTCCACATAAATATATTTTAAATAGGTGGACAAGAGAAGCAAGGTGTGGTGTGGTACATGATAGCAAGGGAAAGGAAATTGAGGTTGATCCTAAACTAGAATGTTCAAATCGATATAGGCAATTGTGTCCAATGATCATAAAATTAGCCAGTGAAGCATCTGAATGTCCAGAGGCATTCTCTATGGTTCATCAAATGGTGCTAGAACTTGGTAAAAAAGTGTCTAAACTTCTTACTAAAAATTCATTAGATGGTGTTGATAATGAAGCTGGCGTTAATAATGATGATGATGGAAAAAATTATGGTGAAGGCATTGGATTCAAAAAAAGAGAACGCAAGAAGATTGATAAAAGTTGGGTTGACAACCCTAATCAGAAAAGAAGAAAAGTTAAAAATTCAAAAAAAGCTGCTCACAAGCCTTCGCAAAGTTTGAAGGAAACCCAAAAGTCAACTCAGGTACATCATAGTCTGCCTGTGTCAAATACACTTGTGACTATGCAATATGGCCCTCCTATATCAACTACACCAGTTTCAATGCAATATGGTTCTGCTATGTCAAATACTCCAATGCCAATGCAATATGGTCCCCCTGTCTCAACTACACCAGTGCCACTACAATATGGTCCTCATGTGTCATCTTCACTAGTTCCAATGCAATATGGTCTCCCTATATCAAATACATCAACACCAATGCAACACGGCTCCATTGGACCATGA 2388 0.3606 MTPTLDLEFDNLEEAWQYWVGYGKRMGFGVRKENSNKSKKDGSIIYYKYVCHKEGVRKPDKRDFKIRKPRQETRTGCEVRMIVKKVNGRFRVSELYLDHNHPLEPQETVHMFASQRKLPEAQGYALEAAEDVGIKQKASFNLMSKYAGGRANLGYTEEDIKSYLRARRQRKMCYGEAGCLLRYFQHQLTENPSYFHAYQVDSEDRITNVFWADPRMLLDYDCFGDVISFDTTYSTNRENRPLAIFSGFNYYREVVIFGAALLYDETIESFKWLFETFLQAHKEKLPFTVFTDQDAAMARDLEEVMPTVKHGLCTFHINRNAVKHLGNLMKDDSHFLGKFNWCMYHCEEKIVFEESWKELLLKYNAVDNPWLMSIYELKEKWAACYMKDSKTLGMRSTQLSESINSFIKSCTNPELNINQFFEIFEQVVVDKRYNELKSDFNSRQKLPRLILKSSSMLQQLSEIYTPPIFDLFQQEYDLRDATCIKESKERKINEDDDAIVFEYVITRVDKKGEWRLTYEPAREDKESNITCSCKKFEQWGILCCHALRILYDRDVKLLPHKYILNRWTREARCGVVHDSKGKEIEVDPKLECSNRYRQLCPMIIKLASEASECPEAFSMVHQMVLELGKKVSKLLTKNSLDGVDNEAGVNNDDDGKNYGEGIGFKKRERKKIDKSWVDNPNQKRRKVKNSKKAAHKPSQSLKETQKSTQVHHSLPVSNTLVTMQYGPPISTTPVSMQYGSAMSNTPMPMQYGPPVSTTPVPLQYGPHVSSSLVPMQYGLPISNTSTPMQHGSIGP 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral802g00002 795 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 632 IPR031052 GO:0006355
Pral802g00002 795 SMART 26again6 529 556 IPR006564 GO:0008270
Pral802g00002 795 Pfam FAR1 DNA-binding domain 18 104 IPR004330 -
Pral802g00002 795 ProSiteProfiles Zinc finger SWIM-type profile. 516 554 IPR007527 GO:0008270
Pral802g00002 795 Pfam MULE transposase domain 226 320 IPR018289 -
Pral802g00002 795 Pfam SWIM zinc finger 524 551 IPR007527 GO:0008270
Pral802g00002 795 MobiDBLite consensus disorder prediction 642 712 - -
Pral802g00002 795 MobiDBLite consensus disorder prediction 649 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral802g00002 Pral-Chr802 8173 10761 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral802g00002 MULE 6.7e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral802g00002 - - pcin:129316824 1251.11