Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral78g00002 ATGGATCCATCTTCCATCACTGGACCTCTATGGGAAATGATCAAGTGTTGCTGTTGTTACCTCAACCAAGAAGCTGCTTATATCTACGACTTGGAAGAGAATCTGCAATCGCTGGAAGAAAAATGGAAGAAGGTTAAAGGGATGAAGAAAGATGTGGAAGCAATTCTCGAAGAAGAAGAAAAAGCAGGAGAAAAGCAAAGGTCTCACCAAGTGAGTGGGTGGCTGAATAGAATCGAGAGAACTCAAGAGGAAATAGAAGATATTCGAGTTCGTAGAACTAAACCGATTCAAAACAAATGTCTAAGTGGATGTTGTCCAAAGAATTGCATGTCAAGCTACAAGTTAGGAAAGGATGTTGCCAAGACTCTAAAGAATGTAGACGAACTAGAAACTGAAGGGGAAAGGTTTTGTAAGGCTTTTGAAATTGCGCTCAAGCCCCTGCATAAGTGGAATGAGATGCCTTCTGGTGAGACGGTGGGCTTAGATTTAATGTTTGATAAGGTATGGAAAAGTATTGAAGAAAAAAATGTTGGAATCATTGGCTTATACGGGATGGGCGGGGTAGGAAAGACTACCTTGCTGAAGAAAATTAATAATGAACTTGGGAAGAGATCATCAGCCTTTTACATTATGTGGGTGGTGGCGTCCAGAAGTCCCAGCTTAGATAGTATTATGGACAGCATCAGAAAATCGGTAGGGATTGGAGATGACCTTTGGACTCATTGTAGCAACCAAGATGAAAAAGTTGCAAAGATTTACAAAATCTTGAAGAAAAAAAAATTTGTTTTGTTATTGGATGATATATGGGTGAGCTTGGACTTGGAAAAAGTGGGAGTGCCACATCCAAAGAAAACTAATTTTCAGTCTAAAGTGTTATTTACAACACGATTTGAGGATGTGTGCGCAAAAATGGAAGCTCAAAAAAAATTTGAAGTTAAAATTCTAACAGAGAAAGAAGCGCTAGAGTTATTTTGTATGAAAGTTGGTGAGGAAACTTTAAAATCTGACCCTATCATTCCAAAGCTAGCAGGGGAGATGGCTAGAGAATGTAAAGGGCTACCGCTTGCATTAACTGTGGTAGGAAGGGCCATGGCTGGTGTGAAAAGTGTGGAAACATGGGAAGACTCAAAGAATAACTTAAGAAGTTCCTCACGGACAGCTTCAGATGTGGAGACAGAGGTGTTTTCTATCCTCAAGTTTAGCTATGATCAACTAGACGAAACACACAGAGAGTGTTTCCTATACTGTGCGTTATACCCAGAGGATTATGAGATTCAAGTGGACGATCTCATTGAGAAATGGATAGGGGAGGGATTTCTTTATAACAATGGGATGAGAAGTGTACATGAAATGCGTGACGATGGCATATCCATAATTGACAACTTGAAGCTATCATGCTTATTAGAGTATGTTGAAGGTGATATCTTTATGAAGCTCTCAATTAAGATGCATGATGTCATTCGTGACATGGCATTATGGATAGCCCGAGATCAAGATAGAAACAAAAAGAAAGTTATAGTACAAGAAGATGCACGGGCATTGTCTCAAGCTAATGTTGAAAATTGGGAAATGGTTGAAAGGATTGCCCTCATGAATAGTGCTAGACGTGCGAATGAATCGTGTATACAATTACAAGGCATAACTTGGCCAAATCTCATAACATTAATACTGAAGTTTGATGGCGGTGGTTTTGTCGCAGTAAATGGATTACAAAACATCCAACATGCCAGGCAATTAAAAGTCTTGGAACTACGCAGAGTGAAAAATGTACCTGCTGCAGAAATAGGTGGCTTAGATCTTTTGGAATATCTATCATTGGAAATATTCAAATTAACGAATGCATCAGACTTTTGGAGAGAGCTGAAGAATTTGAAAAAACTAAAGGTTCTTCACTTATTTTTAATTGCTGATGATGATACTCCTTTAGGACTAATATCAAATCTTCATCAACTGAAGGTGTATAGACTTGACACCCGTGTAACTGGCATAGATGAGGAAGAAGAGAAAACATTTCAAGAGCTGGAGCAATCATCAAACTTAGGGGAAATATGGGTGCAAATTAAATCTGAGAGTAGCCTCAACGTACTATTTAAATCAGCCAAGTTACAGAGCTCCATATATGGCCTTGAGATTCTCCGTTTTCAAATTAACATGCCATCATTAGTGGCAACCATGTCAAAAATGAAGCACCTGCAGCGTCTTGTCTTGGAATTTTTGCCTACTAAGATGGATCCTTCTATTTATGACACGTGTTGTCTATCCATGCTTCGAACTGTGGAAATTTTAGAGGTCAATACAATACATCATTTGACATGGTTGAAGTATGCTCCGCTCCTTCAAGAACTTTCTGTTGGACAGTGCTCGTCAATAGAAGAAGTGATAAAGGGAGAAATATTAGAAGATGAGAAAGATACCATATTCCCTTCTCTTGTAGAGCTGACATTATTCAAATTGCCAAATCTTAGGAGAATTCATGAGAGAGTTCTGTCTTTCCCTTTCCTAAGATCCATTATGGTGTACAACTGTAAGGAGCTGAAGAAGTTGCCTTTTGATTCCAATTCTGCCAATGCTAAGTTGAGAGGTATCGGGGGATCTCAAGTCTGGTGGGACAACTTAGAGTGGGATGACCCCGCTATTAAATCCACTTTCCAGTCTAAATTTCGTCCTTCACCGTATTGA 2679 0.3916 MDPSSITGPLWEMIKCCCCYLNQEAAYIYDLEENLQSLEEKWKKVKGMKKDVEAILEEEEKAGEKQRSHQVSGWLNRIERTQEEIEDIRVRRTKPIQNKCLSGCCPKNCMSSYKLGKDVAKTLKNVDELETEGERFCKAFEIALKPLHKWNEMPSGETVGLDLMFDKVWKSIEEKNVGIIGLYGMGGVGKTTLLKKINNELGKRSSAFYIMWVVASRSPSLDSIMDSIRKSVGIGDDLWTHCSNQDEKVAKIYKILKKKKFVLLLDDIWVSLDLEKVGVPHPKKTNFQSKVLFTTRFEDVCAKMEAQKKFEVKILTEKEALELFCMKVGEETLKSDPIIPKLAGEMARECKGLPLALTVVGRAMAGVKSVETWEDSKNNLRSSSRTASDVETEVFSILKFSYDQLDETHRECFLYCALYPEDYEIQVDDLIEKWIGEGFLYNNGMRSVHEMRDDGISIIDNLKLSCLLEYVEGDIFMKLSIKMHDVIRDMALWIARDQDRNKKKVIVQEDARALSQANVENWEMVERIALMNSARRANESCIQLQGITWPNLITLILKFDGGGFVAVNGLQNIQHARQLKVLELRRVKNVPAAEIGGLDLLEYLSLEIFKLTNASDFWRELKNLKKLKVLHLFLIADDDTPLGLISNLHQLKVYRLDTRVTGIDEEEEKTFQELEQSSNLGEIWVQIKSESSLNVLFKSAKLQSSIYGLEILRFQINMPSLVATMSKMKHLQRLVLEFLPTKMDPSIYDTCCLSMLRTVEILEVNTIHHLTWLKYAPLLQELSVGQCSSIEEVIKGEILEDEKDTIFPSLVELTLFKLPNLRRIHERVLSFPFLRSIMVYNCKELKKLPFDSNSANAKLRGIGGSQVWWDNLEWDDPAIKSTFQSKFRPSPY 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral78g00002 892 SMART AAA_5 176 316 IPR003593 GO:0016887
Pral78g00002 892 FunFam Probable disease resistance protein At1g61300 143 309 - -
Pral78g00002 892 Gene3D - 149 314 IPR027417 -
Pral78g00002 892 FunFam Probable disease resistance protein At1g63360 402 493 - -
Pral78g00002 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 416 IPR027417 -
Pral78g00002 892 Gene3D - 402 492 IPR036388 -
Pral78g00002 892 Coils Coil 21 41 - -
Pral78g00002 892 Gene3D Ribonuclease Inhibitor 494 858 IPR032675 -
Pral78g00002 892 FunFam Probable disease resistance protein At5g66910 314 401 - -
Pral78g00002 892 SUPERFAMILY L domain-like 482 853 - -
Pral78g00002 892 Coils Coil 71 91 - -
Pral78g00002 892 PRINTS Disease resistance protein signature 574 590 - -
Pral78g00002 892 PRINTS Disease resistance protein signature 179 194 - -
Pral78g00002 892 PRINTS Disease resistance protein signature 350 364 - -
Pral78g00002 892 PRINTS Disease resistance protein signature 255 269 - -
Pral78g00002 892 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 849 - -
Pral78g00002 892 Pfam NB-ARC domain 164 404 IPR002182 GO:0043531
Pral78g00002 892 Gene3D - 315 401 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral78g00002 Pral-Chr78 11679 29772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral78g00002 157 504 WRKY Transcription Factor Family AT5G45050 22.841 7.99e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral78g00002 - K13459 adu:107480591 617.461