Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral762g00003 ATGGCTTCTTCCTCTTCTTCCTCTCTTTCTTCCAAGAAGTACGATGTCTTCATCAGCTTTAGAGGCGAAGACACGCGCGAAAGTTTCACCAGCCATCTTCACTCTGCTCTCCTTAGAAGCAAAATCGACACCTACGTCGATTACAGACTTGAGAAAGGAAGCGAGGTTTGGCCATCACTCCTCCAAGCCATTGATGATTCGATCCTTTTTCTGGTCGTTTTTTCTGAGAACTATGCTTCTTCCACGTGGTGCTTGAATGAGCTCACCAAAATTGTCTTCGATTGCTCTGAGGATCAGGAGGATCGTGTTCTTCCAGTTTTCTACAGGGTAAACCCTTCAAATGTACGGAAACAGAAAGATAGTTACGGAGAAGCATTTATAACACACGAGCAAGGCAATCACAATCAGCTAGTGCTAAAATGGAGGAGTGCTCTCACTCGGGCAGCTAATTTATCTGGCTGGGATTCTAGTAAATATTGGAATGAAGCTGACCTGATTGAAAAAATTGTCAAATGTGTTTTAAAGAAGTTGGATCGTATTTACCGAATAGACTGTTTTGAAGGTCTTGTTGGAATTCATGAACGAATTGTGCCTCTAGAATCGTTTTTGAGCGAGGAGTCGAAAGATGTTCAATTTATTGGAATTTGGGGCATGGCTGGAGTTGGCAAGACAACTATTGCAGCTGCAGTATTTAAAAAACATTGCTGTGATTATGAAGGGTTTTGCTTCATGGCCAATGTAAGAGAAGAGTCAGAGAAGTGTGGAATCACTAATTTGAAGAATAAACTTCTTTCCAAATTATTAGAGGATAAAGAATCTCAAGATGGTATGCCAGATAGAGGAACTCCTTTGGATATGAAGAGGCTTAGACGAACAAAGGTTCTTGTTGTTCTTGATGACGTCAGTAACTCAGATCAACTGGAAATTTTAGCTGGAGTGCATAATTGGTTTGGACCAGGCAGTAGAATCATTATAACATCCAGAGATAGACAAGTGCTTGGTAAACAAGTGGATCATATATACGAGGTTAAAGCTTGGGGCTTTGGTGAAGCTCTTCAACTTTTCAATTTGAATGCCTTTAAAAATAACGTTACTGACGAAGAGTTTGCCTTATTATCAAGGAAGGTGGTTGGCTATGCAAAAGGGATTCCATTGGCTCTGAAAATTTTGGGTTCATTTCTTTGTGGCAAAAGTAAAAATGAGTGGAAAAGTCAATTAGAAAAACTCAAAGGAATGCCTGACATGAAAATTCAAAATGTATTGAAATTGAGTTATGACGGATTAGATTTCCAACAGAGAAATATTTTTCTAGATATTGCATGCTTTTTCAAGGGCAGAAATGTAGATGACATAAAAAATTTGTTAGATGCTTGTGATTATGCGACAACCATTGGATTGAAGACTCTTGAAGACAAAGCTCTTCTAACTATTATTGATGAGAAGGTGTCAATGCATGATCTAATACAAGAAATGGCATGGGAGTTAGTTCGAGAAGAATCAAGGGAAGAACCTGGAAAACGCAGCCGATTATGGGATTCTCATGATGCTTATGAAGTATTGAAATATAAAACGGGAACTGAGTCAATTAAAGGCATGGCTTTGGATATGTCGAAAATTGAGGATCTGTGCTTAAGTCCTGACGTCTTCGCCAGAATGCGCAAGCTTAAATTTCTTATATTCCATAATTTTGGTTCAGAAGAGTTCAGATTGTATCTTCCTCAAGGCCTTAAATCTCTACCAAATGAACTCAGACTTCTTCAATGGGATAACTTCCCTTTGAAGTCCTTACCATCGACATTCTCCGCGGAGAAGCTTGTTTGGTTTGAAATGCGAAATAGCCAAGTCAGGATACTTTGGCATGGAAAGCAAGTAAGTGTATAG 1881 0.3913 MASSSSSSLSSKKYDVFISFRGEDTRESFTSHLHSALLRSKIDTYVDYRLEKGSEVWPSLLQAIDDSILFLVVFSENYASSTWCLNELTKIVFDCSEDQEDRVLPVFYRVNPSNVRKQKDSYGEAFITHEQGNHNQLVLKWRSALTRAANLSGWDSSKYWNEADLIEKIVKCVLKKLDRIYRIDCFEGLVGIHERIVPLESFLSEESKDVQFIGIWGMAGVGKTTIAAAVFKKHCCDYEGFCFMANVREESEKCGITNLKNKLLSKLLEDKESQDGMPDRGTPLDMKRLRRTKVLVVLDDVSNSDQLEILAGVHNWFGPGSRIIITSRDRQVLGKQVDHIYEVKAWGFGEALQLFNLNAFKNNVTDEEFALLSRKVVGYAKGIPLALKILGSFLCGKSKNEWKSQLEKLKGMPDMKIQNVLKLSYDGLDFQQRNIFLDIACFFKGRNVDDIKNLLDACDYATTIGLKTLEDKALLTIIDEKVSMHDLIQEMAWELVREESREEPGKRSRLWDSHDAYEVLKYKTGTESIKGMALDMSKIEDLCLSPDVFARMRKLKFLIFHNFGSEEFRLYLPQGLKSLPNELRLLQWDNFPLKSLPSTFSAEKLVWFEMRNSQVRILWHGKQVSV 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral762g00003 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 439 IPR027417 -
Pral762g00003 626 Gene3D - 189 341 IPR027417 -
Pral762g00003 626 FunFam Disease resistance protein (TIR-NBS-LRR class) 348 429 - -
Pral762g00003 626 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Pral762g00003 626 Gene3D - 349 429 IPR042197 -
Pral762g00003 626 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Pral762g00003 626 Pfam NB-ARC domain 201 412 IPR002182 GO:0043531
Pral762g00003 626 Pfam TIR domain 13 191 IPR000157 GO:0007165
Pral762g00003 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 617 IPR044974 GO:0006952
Pral762g00003 626 Gene3D - 10 182 IPR035897 -
Pral762g00003 626 PRINTS Disease resistance protein signature 380 394 - -
Pral762g00003 626 PRINTS Disease resistance protein signature 212 227 - -
Pral762g00003 626 PRINTS Disease resistance protein signature 288 302 - -
Pral762g00003 626 SMART till_3 13 151 IPR000157 GO:0007165
Pral762g00003 626 SUPERFAMILY "Winged helix" DNA-binding domain 416 521 IPR036390 -
Pral762g00003 626 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral762g00003 Pral-Chr762 46168 48492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral762g00003 10 624 WRKY Transcription Factor Family AT4G12020 34.355 3.02e-97 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral762g00003 - - pcin:129291215 683.715