Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral762g00002 ATGACTGCTCTGAAAGAATTTGTTCTTTCTGGATGTCTTCAAGTAAAATTTCTCCCAGAGTTTGGAGAAAGTATGAAAAATCTTGAAACACTTGATGCTGGGGAGACAAATTTAGTCAAACTACCTGAGTCACTTAGCTTATTGATTGGTCTTAAGACTTTGAAATTAAGGGGCTGTAAAAATCTTGTTTGCCTTCCTCAGAGCATTCACAATTTGAAGCGCCTTGTAGTTATTGATATATCTGGCTGCTCAAAGTTTTCTAGATTGCCAGAAAAGTTGAATGAAATTGAAGGCTTGGAGGAGCTCGACGCAAGTGAAACCGATATAACAGAAATACCTCCTTCCATTGGTGGTTTAGAGAAACTCAAGAAATTGTCATTTCGTCGGTGCAAAAGGTCGATGTTATACCCTTGGAGCATGATTCTTCCTTGGGGGCATTCAATTCATAAGGGCTTAACATTGCCTTCTTCAATGCTGAGTATTAAATCACTGAGAGAATTGGATTTAGGCTATTGCAAGATTGATGATGCATCCATGCCAGATGACTGGAGGGGCTTATCATCATTGGAGAGATTAGATCTGAGTGGAAATAATTTTAAGAGTCTACCTGCTGGCTGCATAGCTAATCTTTTGAAATTGGAACGTCTGTATTTAAATTCTTGCTCTGAACTTCAGTCGTTGCCGCAGACTCCGCCAAGTTTATGTATCCTGGAGTTAGAAGAATGTGCTTCGTTGGAAACAGTGGGAGGTGAACAATTATCACATTTCTTTGCTTCAATGGACCAATGGAAGGTGAAAACAACGCCTTGGATGGATGAAACTCTCTCGGTGACTACTCCTGGACGTGAAATACCATCATGGTTTGACCATCAAATTGATCTTTGTCTGGATGAATATGGTAGTGCTTTATTGATGGTAGACATACCTTCTTGGGAAGAAATGGTGGGAATTGGATTATGCACTCCGTTAGAAGGTAAGTTTTATTCCACTGAACCCGACACAAGAGAATCGGCTTTGTCGTGGAGTCTTTATGATTTCGCAGTACATCCCAAAAACCACAAGACGATAAGGGCATTTGATTGTGATGGCGAGAAGAAAAGAAAGTCTTGTCACCTTTGGCTAGGGTTCTGGAAACATACAAAGGAATTCTGTGCCTTGGAGTGCTCAAGAAAGCACAGTCAGCTTCCCTTCATTTTTAATGCCGGCCATAATAATGCAAAAGTTTCAATGAAGTGTGGATGGCGTGTCATACGCAAAAGTGATTTTGAAAACAGCAGTAGCTCAATAATGAGTCGAAGTCGCATTCCAATATTGGAGTACCTGGACCAATATCTTCGTCCGCCTGGTCCCCCATGTATGCACGTAGGATTTGGTAGGTCCACTGTATTCACGAGATATGGTCCCATGACGCTCCCTCGCCCAGGTTCAGATTCAAGGCTCGGTGACCCTAGTTGCAAGTTATGTGAATTGACGATAAATGCACAAAAATGGCAAGAAGGACCAATCCAGCAAAATGACGACGAAGGATTAGACGAGTAA 1539 0.4159 MTALKEFVLSGCLQVKFLPEFGESMKNLETLDAGETNLVKLPESLSLLIGLKTLKLRGCKNLVCLPQSIHNLKRLVVIDISGCSKFSRLPEKLNEIEGLEELDASETDITEIPPSIGGLEKLKKLSFRRCKRSMLYPWSMILPWGHSIHKGLTLPSSMLSIKSLRELDLGYCKIDDASMPDDWRGLSSLERLDLSGNNFKSLPAGCIANLLKLERLYLNSCSELQSLPQTPPSLCILELEECASLETVGGEQLSHFFASMDQWKVKTTPWMDETLSVTTPGREIPSWFDHQIDLCLDEYGSALLMVDIPSWEEMVGIGLCTPLEGKFYSTEPDTRESALSWSLYDFAVHPKNHKTIRAFDCDGEKKRKSCHLWLGFWKHTKEFCALECSRKHSQLPFIFNAGHNNAKVSMKCGWRVIRKSDFENSSSSIMSRSRIPILEYLDQYLRPPGPPCMHVGFGRSTVFTRYGPMTLPRPGSDSRLGDPSCKLCELTINAQKWQEGPIQQNDDEGLDE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral762g00002 512 SMART LRR_typ_2 96 119 IPR003591 -
Pral762g00002 512 SMART LRR_typ_2 186 209 IPR003591 -
Pral762g00002 512 SMART LRR_typ_2 25 48 IPR003591 -
Pral762g00002 512 Gene3D Ribonuclease Inhibitor 1 140 IPR032675 -
Pral762g00002 512 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Pral762g00002 512 Gene3D Ribonuclease Inhibitor 145 280 IPR032675 -
Pral762g00002 512 SUPERFAMILY L domain-like 2 250 - -
Pral762g00002 512 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral762g00002 Pral-Chr762 10245 14458 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral762g00002 38 249 WRKY Transcription Factor Family AT4G12020 31.064 1.37e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral762g00002 - - pcin:129302825 427.172