Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral762g00001 ATGGCAAGTAATCAAGGAGGATCTTCTTCAAACTCTTCCAACTCCAATTCAACCCAAAGAACTTGGAAGTATGACATCTTCTTGAGTTTTAGGGGTGAAGACACTCGTAAAGGCTTCACTGACCACTTGTACCATGCACTAGATAAGAGTGGGCTTAAGGTTTTCAGAGATGATGAAGAACTTGAGAGAGGAGAAGTCATTTCCAAAGAACTCAAACAAGCAATTGAGGATTCTCTATTTGCAATTGTTGTTCTCTCAAAAAATTATGCCTCTTCTTCATGGTGTTTAGATGAGCTTAAACATATTCTTTACTCAAGAAACAATTTGTCTCAACAAGTTTTCCCCATATTTTATGATGTAAATCCATCTGACGTACGGCATCAAAGAGAAAGTTTTGCCGAAGCTTTTGCTAGGCATCAAATGCTTCAAAGGGACAATGAGGTCATGAAATGTTGGAGAGATTCTCTCAGGGAGGTTTCAGACTTATCTGGTTGGGATTGCAATAAATATAGGTCTGAAGCAGAACTTGTTGACACAGTGGTTGAGGAGTTGTGGACCAAATTACATCCTAGACTACCACCTTATACTGAAGGACTCATTGGAATTGACAATAAAGTGGAACAACTAGAGCCACTGTTGGAGATAGGTTCGAATGATGTTCGGTTTGTAGGAATATGGGGCTTAGGGGGTGTTGGGAAGACAACAATTGCTTGGGTTGTTTTTGAGAAATATTGTAGCCAATTTGATATTAGTTGCTTTCTTCACAATGTTAGGGTAGCTTCCAAAAGAGATGGTGGCGAGGTTCAGTTACAAAGTCAATTTCTTTCAAAACTCAAAAGAAGAAACATGAAAATTGAAAACAGCTATGAAGGGAAGAAAATAATCCAAAACCGTTGTTGCAATAAAAAGGTTTTACTTATCCTTGATGACGTTAGCCATACAACCCATTTAGAAAATTTGGCTAATAGCCCAAACTGGTTTGGTGCTGGGAGTAGAGTGATCATAACAACTAGGCATTTAGACTTGTTACGTGGAGCGCGTGTAGCATATCAACACGAGGTTAAAACTATGAACCCAAATGAAGCCCTTCAACTCTTTTGTCAGAAAGCATTTGGAAGAAGTGAGCCTCAGGAGGATTTGTTGGAGCTGTCTAAAATTGTTTGTGATTATGCAGGAGGCCTTCCTTTAGCTCTCTCTGTTTTGGGCTCTTTTTTTTGTGGAAAAAGTATTGTGCAATGGGAAGATGCTTTGGATATGTTGAGGAAAGATGCCTTGGGAATGTTGAGGAAAGATCCCCATGAAGATATTTTTGGGATACTTAAAATAAGTTTTGATGCATTAACTGATATAGAACAAGCAATATTTTTAGATATTGCTTGCTTCTTCAATGGTTGGAGCAAAAACAAAATAACAAAAATATTAGAAAATTGTGGTTTTAATGGAAAAATTGGAATAACAACTCTCCAAGAAAAATCTATGCTGAAGGAATATGGCAGTACTTTAGTGATGCATGATTTGGTGGAACAAATGGGTAGGAAAATTGTTGTGGATAAGTCTTCTAATTATGTTGGAAACCGTAGTAGATTGTGGACTAATGAAGACATTGATAAAGTTATGGAAAACAATTTAGGTACAAATGAAATACAAGGTATGGTTTCATCCACATCTTGTGACACATTTTGGGATTTTGAACCATTTTCAACATTGCATAATGTTGTTTACCAAGGCACAAAAGAAATAAAAGGTATGGCCTCATCCACATCTTATAAGGCATTTTGGGATCCTGAAGCATTTTCAACATTGCACAACCTCAGATTACTGATGATATCAAGTGATTTTCATCTCCCTAATGGCCTCAAATGTCTTTCTCATGCTTTGAAAGTACTTTATTGGACAAAATATCCTCTAAACACTCTTTCTTCTGGAACCCGATTGCATGAACTTGTTGATCTTAGAATGAATCATAGCAAATTAAAGAAACTTAGCCTGTGCTCAAAGAATTTGAAGATTTTGGACTTGCGTTATTCCAAAAACTTGATTGAAACTCCTGATTTTTTGGAAATTCCAAACCTGGAAAGATTGGAACTCGAAGGTTGTGAAGAACTTGTTGACCTTCATGCTTCGATCGGACAACTCAAAAAGTTGCAAAAATCTTAG 2157 0.3695 MASNQGGSSSNSSNSNSTQRTWKYDIFLSFRGEDTRKGFTDHLYHALDKSGLKVFRDDEELERGEVISKELKQAIEDSLFAIVVLSKNYASSSWCLDELKHILYSRNNLSQQVFPIFYDVNPSDVRHQRESFAEAFARHQMLQRDNEVMKCWRDSLREVSDLSGWDCNKYRSEAELVDTVVEELWTKLHPRLPPYTEGLIGIDNKVEQLEPLLEIGSNDVRFVGIWGLGGVGKTTIAWVVFEKYCSQFDISCFLHNVRVASKRDGGEVQLQSQFLSKLKRRNMKIENSYEGKKIIQNRCCNKKVLLILDDVSHTTHLENLANSPNWFGAGSRVIITTRHLDLLRGARVAYQHEVKTMNPNEALQLFCQKAFGRSEPQEDLLELSKIVCDYAGGLPLALSVLGSFFCGKSIVQWEDALDMLRKDALGMLRKDPHEDIFGILKISFDALTDIEQAIFLDIACFFNGWSKNKITKILENCGFNGKIGITTLQEKSMLKEYGSTLVMHDLVEQMGRKIVVDKSSNYVGNRSRLWTNEDIDKVMENNLGTNEIQGMVSSTSCDTFWDFEPFSTLHNVVYQGTKEIKGMASSTSYKAFWDPEAFSTLHNLRLLMISSDFHLPNGLKCLSHALKVLYWTKYPLNTLSSGTRLHELVDLRMNHSKLKKLSLCSKNLKILDLRYSKNLIETPDFLEIPNLERLELEGCEELVDLHASIGQLKKLQKS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral762g00001 718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 717 IPR044974 GO:0006952
Pral762g00001 718 SUPERFAMILY "Winged helix" DNA-binding domain 435 539 IPR036390 -
Pral762g00001 718 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Pral762g00001 718 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Pral762g00001 718 Gene3D - 189 351 IPR027417 -
Pral762g00001 718 Gene3D Ribonuclease Inhibitor 585 717 IPR032675 -
Pral762g00001 718 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Pral762g00001 718 SMART till_3 23 162 IPR000157 GO:0007165
Pral762g00001 718 Gene3D - 356 448 IPR042197 -
Pral762g00001 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 458 IPR027417 -
Pral762g00001 718 Pfam TIR domain 23 191 IPR000157 GO:0007165
Pral762g00001 718 Gene3D - 17 188 IPR035897 -
Pral762g00001 718 PRINTS Disease resistance protein signature 222 237 - -
Pral762g00001 718 PRINTS Disease resistance protein signature 298 312 - -
Pral762g00001 718 PRINTS Disease resistance protein signature 391 405 - -
Pral762g00001 718 PRINTS Disease resistance protein signature 686 702 - -
Pral762g00001 718 Pfam NB-ARC domain 206 445 IPR002182 GO:0043531
Pral762g00001 718 SUPERFAMILY L domain-like 591 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral762g00001 Pral-Chr762 6720 10229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral762g00001 200 716 WRKY Transcription Factor Family AT5G45050 33.396 1.43e-69 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral762g00001 - - pcin:129302825 790.415