Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral760g00008 ATGGAGAATCTGGTTTTGCTCCTTTTGAGATCTGCCCTGTATCTGTTCATCAGCACTATGTTCTGCCAGGTGCTATTTGGGATTCTCCTTCTTGTTTACATTCCCAGTTTAGTTCCTTACTCTGGCTACGTAACAGTACAAGAAGATTTTCATGAGAATGCTGAGTATGAACTACTTTGTGGAGAACAGCAAGTTTTCCCCGAGAGATATGTTAATGTATTTTCCAGATTGTCGTTTGGTTGGATGACTCCACTCATGCAACAAGGCTATAGAAAACCCATCACTGAAAATGATGTTTGGAAGTTAGACACATGGGATCAAACGGACATGCTTTTTGAAAATAGGTTCCAAAAGTGTTGGATGTTAGAACGTCAAAGGTCTAAACCTTGTCTTTTAAGAGCATTAAATAATAGCCTTGGAAAAAGGTTTTGGTGGGGAGGCGTTTTTAAGATTTGTTATGATCTTTCTCAGTTTGTGGGGCCTATTTTGCTGAATCATTTATTAAAATCGATGCAACAGGGAGATCCATCTTGGATTGGCTACATCTATGCTTTCTCCATATTTGCAGGAGTGTCATTTGGTGTACTTTGTGAGGCTCAATATTTTCAAAGTGTTATGCGTGTTGGTTTCCAGCTAAGGTCAACTTTGGTGGCTGGCATATTTTACAAGTCCCTGAGATTGAGGCATGAGGATCGTAGCAAGTTCTCGTCTGGAAAGATTATGAATATGATGACAACAGATGCCAGTGCTCTACAGCAAATATGTCAGCAACTTCATGGACTTTGGTCATCACCATTTCGTATCATCATGGCTATGGTTCTTCTATACCAGCAATTGGGTGTTGCTTCACTTTTTGGATTACTGATGCTAGTTCTCATTATCCCAATGCAGACAATCGTTCTCAGCAAAATGCGAAAATTCATCAGGGAGGGACAGCAACAGACGGACAGGAGAGTTGGCCTCATGAATGAAATTCTGACTGCCATGGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTCCAGTCTAGAGTCCAAGGCATACGATTTGATGAGCTTTTATGGTTCCGCCATGCACAACTTCTATCTGCTCTTAACACTTTTATGCTGAACAGCATCCCAGTTCTTGTGACTGTAACTACATTCGGAATGTTCACTTTACTTGGTGGAGAGTTGACACCTGCAAGGGCATTTACCTCTTTATCTCTATTTGCAGTTTTGCGTTATCCTTTAAATATGCTTCCCAGTTTGTTGAGTCAGGTTGTGAGTGCAAATGTGTCATTGCAACGTTTACAGGAACTATTCTTAGCTGAGGAGCGATTTTTAAAACCCAATCCACCTCTTGTACCAAGACTTCCAGCCATATCCATCCAGAATGGGTACTTTTCCTGGGATGCTAAGATGGAGAAGCCCGTGTTATCAGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCGATAGTTGGTGGTACAGGACAAGGGAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTATGGCTGATGCAAATGTTATAATCAGAGGCACTGTAGCTTATGTTCCTCAGATTTCATGGATTCTTAATGCTACTGTCCGTGAAAATATACTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGACCATCGAAGTCACTGCATTACAGCATGATATCGACTTACTTCCTGGACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGACAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTCTATATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTTGCCCAAGAGGTTTTCAAGAGCTGTATAAAGGAAGGGCTGCAAGAAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTGCTTAGGGAAGGTGTGATAGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCAGGCAAAATGGAAGAAAAACTAAATCATAAGAATGATAGAGATGTCTATGATAAAACTAATTTTCTACCAGCAACCAATGATGTGATTTTAGAGATTCCAAATGGTACAAGACATAAAAAGAAGGGGAAATTGCAAAAATCCATGCTTATTAGAGAAGAAGATCGGGAAACAGGAGTTGTCAGCTGGAAAGTTTTGATGAGGTACAAGTCTGCTCTAGGAGGACTCTGGGCAGTTTTAGTACTCTTGACATGCTATGTAACGACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTGAGCATGTGGACCAGTAAAACTACTGCAGCTGGTTATAAACAAGGATATTTTATTGCCATCTATGCACTTCTTTCATTTGGGCAGGTAATTGTTACTCTTGCTAACTCTTACTGGCTGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCATGATGCCATGTTACATAAAATACTACGGGCTCCAATGGTATTCTTTCATGCCAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAATGTTGCTAGTTTTGTGAATTTGTTTATGGGTCAATTCTGGCAACTCCTTTCGACTTTTGTTCTTATTGGCATTGTGAGCTCATTATCTCTGTGGGCCATAATGCCACTTCTGATCTTGTTTTATGCAGCTTATTTGTATTACCAGAGTTTATCTCGTGAGGTGAAGAGGTTGGATTCAATTACAAGATCTCCCGTCTATGCACAATTTGCAGAAGCATTGAATGGTTTGACGAGCATTCGTGCTTACAAAGCATATGATAGGATGGCGCACATTAATGGAAGACTCATGGACAACAATATCAGATTCACTCTGGTGAATATTAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAATATTAGGAGGCCTCATGATTTGGTTAATAGCAACGTTTGCTGTAATGCAAAATGCAACAGCCCATAACCAAGCCATGTTTGCAGCTACAATGGGTCTACTTCTCAGTTATTCTTTAAACATCACAAATCTCTTGAGTCGTGTCCTTAGACAAGCTAGTAGAGCTGAAAATAGTTTAAATGCAGTTGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCAGCTATTATTGAGGCTAGCCGCCCACCACCTGGATGGCCATCGTCAGGATCAATTGAATTTGAGGATGTTGTCCTGCGGTACAGGCCCGAGCTTCCTCCAGTCTTGCATGGGTTGTCTTTTAGAGTCTCTCCCACTGAGAAGGTAGGAATTGTCGGACGAACTGGTGCAGGAAAATCCAGCATGCTCAATGCTTTATTCCGGATTGTGGAACCGCATAAAGGAAAAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGAAGATCTACGAAAAGTTCTCACTGTCATACCGCAAACACCAGTTCTTTTCTCTGGAACTGTGCGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGTCGCATTTGAAAAGTGTGGTCAGCAGAAATTCCTTTGGCCTAGATTCTGAGGTTTCTGAGCAGGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGGGCCTTGATACGAAGATCTAAAATTCTTGTTCTAGACGAGGCTACTGCAGCAGTTGATGTTAGAACCGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACGATGCTTATTATTGCACACAGACTGAATACAATTATCGACTGCAATCGTATTCTTGTGATTGATACTGGCAAGGCTCTTGAATACAGCACACCTCAGGAGCTCCTGCTAGAAGAAGAAAGTGCATTTTACAAGATGGTTCAAAGTACTGGACTTGCTAATGCTCAGTACTTACGTGGCCTAGCATTTGGAAAAATTAATGAAAATCCTTGTGAAGAAGACAAGGATCACCAGAAAGAAGGATGA 4041 0.41 MENLVLLLLRSALYLFISTMFCQVLFGILLLVYIPSLVPYSGYVTVQEDFHENAEYELLCGEQQVFPERYVNVFSRLSFGWMTPLMQQGYRKPITENDVWKLDTWDQTDMLFENRFQKCWMLERQRSKPCLLRALNNSLGKRFWWGGVFKICYDLSQFVGPILLNHLLKSMQQGDPSWIGYIYAFSIFAGVSFGVLCEAQYFQSVMRVGFQLRSTLVAGIFYKSLRLRHEDRSKFSSGKIMNMMTTDASALQQICQQLHGLWSSPFRIIMAMVLLYQQLGVASLFGLLMLVLIIPMQTIVLSKMRKFIREGQQQTDRRVGLMNEILTAMDTVKCYAWETSFQSRVQGIRFDELLWFRHAQLLSALNTFMLNSIPVLVTVTTFGMFTLLGGELTPARAFTSLSLFAVLRYPLNMLPSLLSQVVSANVSLQRLQELFLAEERFLKPNPPLVPRLPAISIQNGYFSWDAKMEKPVLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPMADANVIIRGTVAYVPQISWILNATVRENILFGSKFEYERYQKTIEVTALQHDIDLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQEVFKSCIKEGLQEKTRILVTNQLHFLPQVDHIILLREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKNDRDVYDKTNFLPATNDVILEIPNGTRHKKKGKLQKSMLIREEDRETGVVSWKVLMRYKSALGGLWAVLVLLTCYVTTEILRISSSTWLSMWTSKTTAAGYKQGYFIAIYALLSFGQVIVTLANSYWLIISSLRAAKRLHDAMLHKILRAPMVFFHANPVGRILNRFARDLGDIDRNVASFVNLFMGQFWQLLSTFVLIGIVSSLSLWAIMPLLILFYAAYLYYQSLSREVKRLDSITRSPVYAQFAEALNGLTSIRAYKAYDRMAHINGRLMDNNIRFTLVNISSNRWLTIRLEILGGLMIWLIATFAVMQNATAHNQAMFAATMGLLLSYSLNITNLLSRVLRQASRAENSLNAVERVDTYIEMETEAPAIIEASRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVEPHKGKIIIDGCDISKFGVEDLRKVLTVIPQTPVLFSGTVRFNLDPFMEHTDAELWEALERSHLKSVVSRNSFGLDSEVSEQGENFSVGQRQLLSLARALIRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDTGKALEYSTPQELLLEEESAFYKMVQSTGLANAQYLRGLAFGKINENPCEEDKDHQKEG 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral760g00008 1346 Coils Coil 1030 1050 - -
Pral760g00008 1346 FunFam ABC transporter C family member 2 119 440 - -
Pral760g00008 1346 SUPERFAMILY ABC transporter transmembrane region 756 1059 IPR036640 GO:0005524|GO:0016020
Pral760g00008 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 455 679 IPR003439 GO:0005524
Pral760g00008 1346 Coils Coil 673 693 - -
Pral760g00008 1346 Gene3D - 450 702 IPR027417 -
Pral760g00008 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 144 423 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00008 1346 CDD ABC_6TM_ABCC_D1 145 431 IPR044746 GO:0140359
Pral760g00008 1346 CDD ABCC_MRP_domain1 455 655 - -
Pral760g00008 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1079 1313 IPR003439 GO:0005524
Pral760g00008 1346 SMART AAA_5 482 656 IPR003593 GO:0016887
Pral760g00008 1346 SMART AAA_5 1105 1284 IPR003593 GO:0016887
Pral760g00008 1346 ProSitePatterns ABC transporters family signature. 1216 1230 IPR017871 GO:0005524|GO:0016887
Pral760g00008 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 759 1042 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00008 1346 Gene3D - 1062 1315 IPR027417 -
Pral760g00008 1346 Pfam ABC transporter 473 608 IPR003439 GO:0005524
Pral760g00008 1346 SUPERFAMILY ABC transporter transmembrane region 139 439 IPR036640 GO:0005524|GO:0016020
Pral760g00008 1346 CDD ABCC_MRP_domain2 1077 1297 - -
Pral760g00008 1346 ProSitePatterns ABC transporters family signature. 581 595 IPR017871 GO:0005524|GO:0016887
Pral760g00008 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1070 1313 IPR027417 -
Pral760g00008 1346 Pfam ABC transporter 1096 1244 IPR003439 GO:0005524
Pral760g00008 1346 CDD ABC_6TM_ABCC_D2 758 1054 IPR044726 GO:0140359
Pral760g00008 1346 Gene3D ABC transporter type 1, transmembrane domain 720 1060 IPR036640 GO:0005524|GO:0016020
Pral760g00008 1346 Gene3D ABC transporter type 1, transmembrane domain 125 440 IPR036640 GO:0005524|GO:0016020
Pral760g00008 1346 FunFam ABC transporter C family member 2 722 1060 - -
Pral760g00008 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 678 IPR027417 -
Pral760g00008 1346 Pfam ABC transporter transmembrane region 759 1001 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00008 1346 Pfam ABC transporter transmembrane region 146 411 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00008 1346 FunFam Multidrug resistance-associated protein member 4 1063 1315 - -
Pral760g00008 1346 FunFam ABC transporter C family member 2 450 695 - -
Pral760g00008 1346 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 69 1318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral760g00008 Pral-Chr760 97202 116593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral760g00008 455 876 Calmodulin-binding Proteins AT2G36910 22.912 2.33e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral760g00008 - K05665 vun:114175221 2072.36