Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral760g00007 ATGGCTTTTGAGCCGTTAATTTGGTACTGCCAGCCAGAGAAGAACTTCATCTGGGCTAATCTTGTAGACAGTGCTTTTGGGTCCTATACACCATGTGCAATGAACACTATTGTGATCTCCGTCTCCAATTTGGTTCTCATTGTCCTTTGTTTATATCGAATATGGCTGACTATGAGCAATGCCAAAGCTCAAAGATTTTGCTTGAGCTCAAATTACTATAATTATTTTCTGGGATTGTTGGCGGGTTACTGTGCTGCTCAACCTTTACTGAGATTGGCATGTGGCATTTCTGATTTCAACTTGAATGGAGAATCTGGTTTTGCTCCTTTTGAGATAACAGGTCTGATCATTGAAGCACTTACTTGGTCCTCAATGTTAATTCTTCTTGTCATGGAGACTAAGATTTATATAAAGCAATTTCGGTGGTTCGTGAGGTTTGGGGTCTTTTATGTTTTGGTGGCAGATCTTGTAATGCTTAATCTTCTTCTATCAGTAATAAATTACTGCAGCAGATCTGCCCTGTATCTGTTCATCAGCACTATGTTCTGCCAGGTGCTATTTGGGATTCTCCTTCTTGTTTACATTCCCAGTTTAGTTCCTTACTCTGGCTACGTAACAGTACAAGAAGATTTTCATGAGAATGCTGAGTATGAACTACTTTGTGGAGAACAGCAAGTTTTCCCCGAGAGATATGTTAATGTATTTTCCAGATTGTCGTTTGGTTGGATGACTCCACTCATGCAACAAGGCTATAGAAAACCCATCACTGAAAATGATGTTTGGAAGTTAGACACATGGGATCAAACGGACATGCTTTTTGAAAATAGGTTCCAAAAGTGTTGGATGTTAGAACGTCAAAGGTCTAAACCTTGTCTTTTAAGAGCATTAAATAATAGCCTTGGAAAAAGGTTTTGGTGGGGAGGCGTTTTTAAGATTTGTTATGATCTTTCTCAGTTTGTGGGGCCTATTTTGCTGAATCATTTATTAAAATCGATGCAACAGGGAGATCCATCTTGGATTGGCTACATCTATGCTTTCTCCATATTTGCAGGAGTGTCATTTGGTGTACTTTGTGAGGCTCAATATTTTCAAAGTGTTATGCGTGTTGGTTTCCAGCTAAGGTCAACTTTGGTGGCTGGCATATTTTACAAGTCCCTGAGATTGAGGCATGAGGATCGTAGCAAGTTCTCGTCTGGAAAGATTATGAATATGATGACAACAGATGCCAGTGCTCTACAGCAAATATGTCAGCAACTTCATGGACTTTGGTCATCACCATTTCGTATCATCATGGCTATGGTTCTTCTATACCAGCAATTGGGTGTTGCTTCACTTTTTGGATTACTGATGCTAGTTCTCATTATCCCAATGCAGACAATCGTTCTCAGCAAAATGCGAAAATTCATCAGGGAGGGACAGCAACAGACGGACAGGAGAGTTGGCCTCATGAATGAAATTCTGACTGCCATGGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTCCAGTCTAGAGTCCAAGGCATACGATTTGATGAGCTTTTATGGTTCCGCCATGCACAACTTCTATCTGCTCTTAACACTTTTATGCTGAACAGCATCCCAGTTCTTGTGACTGTAACTACATTCGGAATGTTCACTTTACTTGGTGGAGAGTTGACACCTGCAAGGGCATTTACCTCTTTATCTCTATTTGCAGTTTTGCGTTATCCTTTAAATATGCTTCCCAGTTTGTTGAGTCAGGTTGTGAGTGCAAATGTGTCATTGCAACGTTTACAGGAACTATTCTTAGCTGAGGAGCGATTTTTAAAACCCAATCCACCTCTTGTACCAAGACTTCCAGCCATATCCATCCAGAATGGGTACTTTTCCTGGGATGCTAAGATGGAGAAGCCCGTGTTATCAGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCGATAGTTGGTGGTACAGGACAAGGGAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTATGGCTGATGCAAATGTTATAATCAGAGGCACTGTAGCTTATGTTCCTCAGATTTCATGGATTCTTAATGCTACTGTCCGTGAAAATATACTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGACCATCGAAGTCACTGCATTACAGCATGATATCGACTTACTTCCTGGACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGACAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTCTATATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTTGCCCAAGAGGTTTTCAAGAGCTGTATAAAGGAAGGGCTGCAAGAAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTGCTTAGGGAAGGTGTGATAGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCAGGCAAAATGGAAGAAAAACTAAATCATAAGAATGATAGAGATGTCTATGATAAAACTAATTTTCTACCAGCAACCAATGATGTGATTTTAGAGATTCCAAATGGTACAAGACATAAAAAGAAGGGGAAATTGCAAAAATCCATGCTTATTAGAGAAGAAGATCGGGAAACAGGAGTTGTCAGCTGGAAAGTTTTGATGAGGTACAAGTCTGCTCTAGGAGGACTCTGGGCAGTTTTAGTACTCTTGACATGCTATGTAACGACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTGAGCATGTGGACCAGTAAAACTACTGCAGCTGGTTATAAACAAGGATATTTTATTGCCATCTATGCACTTCTTTCATTTGGGCAGGTAATTGTTACTCTTGCTAACTCTTACTGGCTGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCATGATGCCATGTTACATAAAATACTACGGGCTCCAATGGTATTCTTTCATGCCAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAATGTTGCTAGTTTTGTGAATTTGTTTATGGGTCAATTCTGGCAACTCCTTTCGACTTTTGTTCTTATTGGCATTGTGAGCTCATTATCTCTGTGGGCCATAATGCCACTTCTGATCTTGTTTTATGCAGCTTATTTGTATTACCAGAGTTTATCTCGTGAGGTGAAGAGGTTGGATTCAATTACAAGATCTCCCGTCTATGCACAATTTGCAGAAGCATTGAATGGTTTGACGAGCATTCGTGCTTACAAAGCATATGATAGGATGGCGCACATTAATGGAAGACTCATGGACAACAATATCAGATTCACTCTGGTGAATATTAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAATATTAGGAGGCCTCATGATTTGGTTAATAGCAACGTTTGCTGTAATGCAAAATGCAACAGCCCATAACCAAGCCATGTTTGCAGCTACAATGGGTCTACTTCTCAGTTATTCTTTAAACATCACAAATCTCTTGAGTCGTGTCCTTAGACAAGCTAGTAGAGCTGAAAATAGTTTAAATGCAGTTGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCAGCTATTATTGAGGCTAGCCGCCCACCACCTGGATGGCCATCGTCAGGATCAATTGAATTTGAGGATGTTGTCCTGCGGTACAGGCCCGAGCTTCCTCCAGTCTTGCATGGGTTGTCTTTTAGAGTCTCTCCCACTGAGAAGGTAGGAATTGTCGGACGAACTGGTGCAGGAAAATCCAGCATGCTCAATGCTTTATTCCGGATTGTGGAACCGCATAAAGGAAAAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGAAGATCTACGAAAAGTTCTCACTGTCATACCGCAAACACCAGTTCTTTTCTCTGGAACTGTGCGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGTCGCATTTGAAAAGTGTGGTCAGCAGAAATTCCTTTGGCCTAGATTCTGAGGTTTCTGAGCAGGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGGGCCTTGATACGAAGATCTAAAATTCTTGTTCTAGACGAGGCTACTGCAGCAGTTGATGTTAGAACCGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACGATGCTTATTATTGCACACAGACTGAATACAATTATCGACTGCAATCGTATTCTTGTGATTGATACTGGCAAGGCTCTTGAATACAGCACACCTCAGGAGCTCCTGCTAGAAGAAGAAAGTGCATTTTACAAGATGGTTCAAAGTACTGGACTTGCTAATGCTCAGTACTTACGTGGCCTAGCATTTGGAAAAATTAATGAAAATCCTTGTGAAGAAGACAAGGATCACCAGAAAGAAGGATGA 4524 0.408 MAFEPLIWYCQPEKNFIWANLVDSAFGSYTPCAMNTIVISVSNLVLIVLCLYRIWLTMSNAKAQRFCLSSNYYNYFLGLLAGYCAAQPLLRLACGISDFNLNGESGFAPFEITGLIIEALTWSSMLILLVMETKIYIKQFRWFVRFGVFYVLVADLVMLNLLLSVINYCSRSALYLFISTMFCQVLFGILLLVYIPSLVPYSGYVTVQEDFHENAEYELLCGEQQVFPERYVNVFSRLSFGWMTPLMQQGYRKPITENDVWKLDTWDQTDMLFENRFQKCWMLERQRSKPCLLRALNNSLGKRFWWGGVFKICYDLSQFVGPILLNHLLKSMQQGDPSWIGYIYAFSIFAGVSFGVLCEAQYFQSVMRVGFQLRSTLVAGIFYKSLRLRHEDRSKFSSGKIMNMMTTDASALQQICQQLHGLWSSPFRIIMAMVLLYQQLGVASLFGLLMLVLIIPMQTIVLSKMRKFIREGQQQTDRRVGLMNEILTAMDTVKCYAWETSFQSRVQGIRFDELLWFRHAQLLSALNTFMLNSIPVLVTVTTFGMFTLLGGELTPARAFTSLSLFAVLRYPLNMLPSLLSQVVSANVSLQRLQELFLAEERFLKPNPPLVPRLPAISIQNGYFSWDAKMEKPVLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPMADANVIIRGTVAYVPQISWILNATVRENILFGSKFEYERYQKTIEVTALQHDIDLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQEVFKSCIKEGLQEKTRILVTNQLHFLPQVDHIILLREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKNDRDVYDKTNFLPATNDVILEIPNGTRHKKKGKLQKSMLIREEDRETGVVSWKVLMRYKSALGGLWAVLVLLTCYVTTEILRISSSTWLSMWTSKTTAAGYKQGYFIAIYALLSFGQVIVTLANSYWLIISSLRAAKRLHDAMLHKILRAPMVFFHANPVGRILNRFARDLGDIDRNVASFVNLFMGQFWQLLSTFVLIGIVSSLSLWAIMPLLILFYAAYLYYQSLSREVKRLDSITRSPVYAQFAEALNGLTSIRAYKAYDRMAHINGRLMDNNIRFTLVNISSNRWLTIRLEILGGLMIWLIATFAVMQNATAHNQAMFAATMGLLLSYSLNITNLLSRVLRQASRAENSLNAVERVDTYIEMETEAPAIIEASRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVEPHKGKIIIDGCDISKFGVEDLRKVLTVIPQTPVLFSGTVRFNLDPFMEHTDAELWEALERSHLKSVVSRNSFGLDSEVSEQGENFSVGQRQLLSLARALIRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDTGKALEYSTPQELLLEEESAFYKMVQSTGLANAQYLRGLAFGKINENPCEEDKDHQKEG 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral760g00007 1507 ProSitePatterns ABC transporters family signature. 1377 1391 IPR017871 GO:0005524|GO:0016887
Pral760g00007 1507 Gene3D - 611 863 IPR027417 -
Pral760g00007 1507 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Pral760g00007 1507 SUPERFAMILY ABC transporter transmembrane region 300 600 IPR036640 GO:0005524|GO:0016020
Pral760g00007 1507 CDD ABCC_MRP_domain2 1238 1458 - -
Pral760g00007 1507 Gene3D ABC transporter type 1, transmembrane domain 286 601 IPR036640 GO:0005524|GO:0016020
Pral760g00007 1507 Gene3D ABC transporter type 1, transmembrane domain 881 1221 IPR036640 GO:0005524|GO:0016020
Pral760g00007 1507 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 230 1479 - -
Pral760g00007 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 584 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00007 1507 Pfam ABC transporter transmembrane region 307 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00007 1507 Pfam ABC transporter transmembrane region 920 1162 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00007 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1474 IPR027417 -
Pral760g00007 1507 CDD ABCC_MRP_domain1 616 816 - -
Pral760g00007 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 920 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00007 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 839 IPR027417 -
Pral760g00007 1507 Gene3D - 1223 1476 IPR027417 -
Pral760g00007 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 616 840 IPR003439 GO:0005524
Pral760g00007 1507 CDD ABC_6TM_ABCC_D2 919 1215 IPR044726 GO:0140359
Pral760g00007 1507 Pfam ABC transporter 634 769 IPR003439 GO:0005524
Pral760g00007 1507 Coils Coil 1191 1211 - -
Pral760g00007 1507 Pfam ABC transporter 1257 1405 IPR003439 GO:0005524
Pral760g00007 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1474 IPR003439 GO:0005524
Pral760g00007 1507 SMART AAA_5 643 817 IPR003593 GO:0016887
Pral760g00007 1507 SMART AAA_5 1266 1445 IPR003593 GO:0016887
Pral760g00007 1507 FunFam ABC transporter C family member 2 611 856 - -
Pral760g00007 1507 FunFam ABC transporter C family member 2 280 601 - -
Pral760g00007 1507 CDD ABC_6TM_ABCC_D1 306 592 IPR044746 GO:0140359
Pral760g00007 1507 FunFam Multidrug resistance-associated protein member 4 1224 1476 - -
Pral760g00007 1507 Coils Coil 834 854 - -
Pral760g00007 1507 SUPERFAMILY ABC transporter transmembrane region 917 1220 IPR036640 GO:0005524|GO:0016020
Pral760g00007 1507 FunFam ABC transporter C family member 2 883 1221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral760g00007 Pral-Chr760 97202 116911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral760g00007 603 832 Calmodulin-binding Proteins AT2G36910 28.629 1.83e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral760g00007 - K05665 vun:114175221 2310.8