Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral760g00005 ATGGCTTTTGAGCCGTTAATTTGGTACTGCCAGCCAGAGAAGAACTTCATCTGGGCTAATCTTGTAGACAGTGCTTTTGGGTCCTATACACCATGTGCAATGAACACTATTGTGATCTCCGTCTCCAATTTGGTTCTCATTGTCCTTTGTTTATATCGAATATGGCTGACTATGAGCAATGCCAAAGCTCAAAGATTTTGCTTGAGCTCAAATTACTATAATTATTTTCTGGGATTGTTGGCGGGTTACTGTGCTGCTCAACCTTTACTGAGATTGGCATGTGGCATTTCTGATTTCAACTTGAATGGAGAATCTGGTTTTGCTCCTTTTGAGATCTGCCCTGTATCTGTTCATCAGCACTATGTTCTGCCAGTACAAGAAGATTTTCATGAGAATGCTGAGTATGAACTACTTTGTGGAGAACAGCAAGTTTTCCCCGAGAGATATGTTAATGTATTTTCCAGATTGTCGTTTGGTTGGATGACTCCACTCATGCAACAAGGCTATAGAAAACCCATCACTGAAAATGATGTTTGGAAGTTAGACACATGGGATCAAACGGACATGCTTTTTGAAAATAGGTTCCAAAAGTGTTGGATGTTAGAACGTCAAAGGTCTAAACCTTGTCTTTTAAGAGCATTAAATAATAGCCTTGGAAAAAGGTTTTGGTGGGGAGGCGTTTTTAAGATTTGTTATGATCTTTCTCAGTTTGTGGGGCCTATTTTGCTGAATCATTTATTAAAATCGATGCAACAGGGAGATCCATCTTGGATTGGCTACATCTATGCTTTCTCCATATTTGCAGGAGTGTCATTTGGTGTACTTTGTGAGGCTCAATATTTTCAAAGTGTTATGCGTGTTGGTTTCCAGCTAAGGTCAACTTTGGTGGCTGGCATATTTTACAAGTCCCTGAGATTGAGGCATGAGGATCGTAGCAAGTTCTCGTCTGGAAAGATTATGAATATGATGACAACAGATGCCAGTGCTCTACAGCAAATATGTCAGCAACTTCATGGACTTTGGTCATCACCATTTCGTATCATCATGGCTATGGTTCTTCTATACCAGCAATTGGGTGTTGCTTCACTTTTTGGATTACTGATGCTAGTTCTCATTATCCCAATGCAGACAATCGTTCTCAGCAAAATGCGAAAATTCATCAGGGAGGGACAGCAACAGACGGACAGGAGAGTTGGCCTCATGAATGAAATTCTGACTGCCATGGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTCCAGTCTAGAGTCCAAGGCATACGATTTGATGAGCTTTTATGGTTCCGCCATGCACAACTTCTATCTGCTCTTAACACTTTTATGCTGAACAGCATCCCAGTTCTTGTGACTGTAACTACATTCGGAATGTTCACTTTACTTGGTGGAGAGTTGACACCTGCAAGGGCATTTACCTCTTTATCTCTATTTGCAGTTTTGCGTTATCCTTTAAATATGCTTCCCAGTTTGTTGAGTCAGGTTGTGAGTGCAAATGTGTCATTGCAACGTTTACAGGAACTATTCTTAGCTGAGGAGCGATTTTTAAAACCCAATCCACCTCTTGTACCAAGACTTCCAGCCATATCCATCCAGAATGGGTACTTTTCCTGGGATGCTAAGATGGAGAAGCCCGTGTTATCAGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCGATAGTTGGTGGTACAGGACAAGGGAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTATGGCTGATGCAAATGTTATAATCAGAGGCACTGTAGCTTATGTTCCTCAGATTTCATGGATTCTTAATGCTACTGTCCGTGAAAATATACTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGACCATCGAAGTCACTGCATTACAGCATGATATCGACTTACTTCCTGGACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGACAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTCTATATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTTGCCCAAGAGGTTTTCAAGAGCTGTATAAAGGAAGGGCTGCAAGAAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTGCTTAGGGAAGGTGTGATAGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCAGGCAAAATGGAAGAAAAACTAAATCATAAGAATGATAGAGATGTCTATGATAAAACTAATTTTCTACCAGCAACCAATGATGTGATTTTAGAGATTCCAAATGGTACAAGACATAAAAAGAAGGGGAAATTGCAAAAATCCATGCTTATTAGAGAAGAAGATCGGGAAACAGGAGTTGTCAGCTGGAAAGTTTTGATGAGGTACAAGTCTGCTCTAGGAGGACTCTGGGCAGTTTTAGTACTCTTGACATGCTATGTAACGACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTGAGCATGTGGACCAGTAAAACTACTGCAGCTGGTTATAAACAAGGATATTTTATTGCCATCTATGCACTTCTTTCATTTGGGCAGGTAATTGTTACTCTTGCTAACTCTTACTGGCTGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCATGATGCCATGTTACATAAAATACTACGGGCTCCAATGGTATTCTTTCATGCCAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAATGTTGCTAGTTTTGTGAATTTGTTTATGGGTCAATTCTGGCAACTCCTTTCGACTTTTGTTCTTATTGGCATTGTGAGCTCATTATCTCTGTGGGCCATAATGCCACTTCTGATCTTGTTTTATGCAGCTTATTTGTATTACCAGAGTTTATCTCGTGAGGTGAAGAGGTTGGATTCAATTACAAGATCTCCCGTCTATGCACAATTTGCAGAAGCATTGAATGGTTTGACGAGCATTCGTGCTTACAAAGCATATGATAGGATGGCGCACATTAATGGAAGACTCATGGACAACAATATCAGATTCACTCTGGTGAATATTAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAATATTAGGAGGCCTCATGATTTGGTTAATAGCAACGTTTGCTGTAATGCAAAATGCAACAGCCCATAACCAAGCCATGTTTGCAGCTACAATGGGTCTACTTCTCAGTTATTCTTTAAACATCACAAATCTCTTGAGTCGTGTCCTTAGACAAGCTAGTAGAGCTGAAAATAGTTTAAATGCAGTTGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCAGCTATTATTGAGGCTAGCCGCCCACCACCTGGATGGCCATCGTCAGGATCAATTGAATTTGAGGATGTTGTCCTGCGGTACAGGCCCGAGCTTCCTCCAGTCTTGCATGGGTTGTCTTTTAGAGTCTCTCCCACTGAGAAGGTAGGAATTGTCGGACGAACTGGTGCAGGAAAATCCAGCATGCTCAATGCTTTATTCCGGATTGTGGAACCGCATAAAGGAAAAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGAAGATCTACGAAAAGTTCTCACTGTCATACCGCAAACACCAGTTCTTTTCTCTGGAACTGTGCGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGTCGCATTTGAAAAGTGTGGTCAGCAGAAATTCCTTTGGCCTAGATTCTGAGGTTTCTGAGCAGGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGGGCCTTGATACGAAGATCTAAAATTCTTGTTCTAGACGAGGCTACTGCAGCAGTTGATGTTAGAACCGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACGATGCTTATTATTGCACACAGACTGAATACAATTATCGACTGCAATCGTATTCTTGTGATTGATACTGGCAAGGCTCTTGAATACAGCACACCTCAGGAGCTCCTGCTAGAAGAAGAAAGTGCATTTTACAAGATGGTTCAAAGTACTGGACTTGCTAATGCTCAGTACTTACGTGGCCTAGCATTTGGAAAAATTAATGAAAATCCTTGTGAAGAAGACAAGGATCACCAGAAAGAAGGATGA 4278 0.4098 MAFEPLIWYCQPEKNFIWANLVDSAFGSYTPCAMNTIVISVSNLVLIVLCLYRIWLTMSNAKAQRFCLSSNYYNYFLGLLAGYCAAQPLLRLACGISDFNLNGESGFAPFEICPVSVHQHYVLPVQEDFHENAEYELLCGEQQVFPERYVNVFSRLSFGWMTPLMQQGYRKPITENDVWKLDTWDQTDMLFENRFQKCWMLERQRSKPCLLRALNNSLGKRFWWGGVFKICYDLSQFVGPILLNHLLKSMQQGDPSWIGYIYAFSIFAGVSFGVLCEAQYFQSVMRVGFQLRSTLVAGIFYKSLRLRHEDRSKFSSGKIMNMMTTDASALQQICQQLHGLWSSPFRIIMAMVLLYQQLGVASLFGLLMLVLIIPMQTIVLSKMRKFIREGQQQTDRRVGLMNEILTAMDTVKCYAWETSFQSRVQGIRFDELLWFRHAQLLSALNTFMLNSIPVLVTVTTFGMFTLLGGELTPARAFTSLSLFAVLRYPLNMLPSLLSQVVSANVSLQRLQELFLAEERFLKPNPPLVPRLPAISIQNGYFSWDAKMEKPVLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPMADANVIIRGTVAYVPQISWILNATVRENILFGSKFEYERYQKTIEVTALQHDIDLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQEVFKSCIKEGLQEKTRILVTNQLHFLPQVDHIILLREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKNDRDVYDKTNFLPATNDVILEIPNGTRHKKKGKLQKSMLIREEDRETGVVSWKVLMRYKSALGGLWAVLVLLTCYVTTEILRISSSTWLSMWTSKTTAAGYKQGYFIAIYALLSFGQVIVTLANSYWLIISSLRAAKRLHDAMLHKILRAPMVFFHANPVGRILNRFARDLGDIDRNVASFVNLFMGQFWQLLSTFVLIGIVSSLSLWAIMPLLILFYAAYLYYQSLSREVKRLDSITRSPVYAQFAEALNGLTSIRAYKAYDRMAHINGRLMDNNIRFTLVNISSNRWLTIRLEILGGLMIWLIATFAVMQNATAHNQAMFAATMGLLLSYSLNITNLLSRVLRQASRAENSLNAVERVDTYIEMETEAPAIIEASRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVEPHKGKIIIDGCDISKFGVEDLRKVLTVIPQTPVLFSGTVRFNLDPFMEHTDAELWEALERSHLKSVVSRNSFGLDSEVSEQGENFSVGQRQLLSLARALIRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDTGKALEYSTPQELLLEEESAFYKMVQSTGLANAQYLRGLAFGKINENPCEEDKDHQKEG 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral760g00005 1425 FunFam Multidrug resistance-associated protein member 4 1142 1394 - -
Pral760g00005 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 757 IPR027417 -
Pral760g00005 1425 SUPERFAMILY ABC transporter transmembrane region 218 518 IPR036640 GO:0005524|GO:0016020
Pral760g00005 1425 ProSitePatterns ABC transporters family signature. 660 674 IPR017871 GO:0005524|GO:0016887
Pral760g00005 1425 SUPERFAMILY ABC transporter transmembrane region 835 1138 IPR036640 GO:0005524|GO:0016020
Pral760g00005 1425 CDD ABCC_MRP_domain2 1156 1376 - -
Pral760g00005 1425 FunFam ABC transporter C family member 2 529 774 - -
Pral760g00005 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1149 1392 IPR027417 -
Pral760g00005 1425 Gene3D - 1141 1394 IPR027417 -
Pral760g00005 1425 Gene3D ABC transporter type 1, transmembrane domain 799 1139 IPR036640 GO:0005524|GO:0016020
Pral760g00005 1425 Gene3D ABC transporter type 1, transmembrane domain 204 519 IPR036640 GO:0005524|GO:0016020
Pral760g00005 1425 ProSitePatterns ABC transporters family signature. 1295 1309 IPR017871 GO:0005524|GO:0016887
Pral760g00005 1425 SMART AAA_5 561 735 IPR003593 GO:0016887
Pral760g00005 1425 SMART AAA_5 1184 1363 IPR003593 GO:0016887
Pral760g00005 1425 CDD ABCC_MRP_domain1 534 734 - -
Pral760g00005 1425 CDD ABC_6TM_ABCC_D1 224 510 IPR044746 GO:0140359
Pral760g00005 1425 FunFam ABC transporter C family member 2 801 1139 - -
Pral760g00005 1425 CDD ABC_6TM_ABCC_D2 837 1133 IPR044726 GO:0140359
Pral760g00005 1425 Pfam ABC transporter 1175 1323 IPR003439 GO:0005524
Pral760g00005 1425 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 838 1121 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00005 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1158 1392 IPR003439 GO:0005524
Pral760g00005 1425 Coils Coil 752 772 - -
Pral760g00005 1425 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 148 1397 - -
Pral760g00005 1425 FunFam ABC transporter C family member 2 198 519 - -
Pral760g00005 1425 Pfam ABC transporter 552 687 IPR003439 GO:0005524
Pral760g00005 1425 Coils Coil 1109 1129 - -
Pral760g00005 1425 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 223 502 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00005 1425 Pfam ABC transporter transmembrane region 838 1080 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00005 1425 Pfam ABC transporter transmembrane region 225 490 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral760g00005 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 534 758 IPR003439 GO:0005524
Pral760g00005 1425 Gene3D - 529 781 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral760g00005 Pral-Chr760 97202 116911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral760g00005 534 955 Calmodulin-binding Proteins AT2G36910 22.912 2.43e-24 109