LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral753g00008	ATGTTGCCTTCTCTCCGCAAAGCTATCGGTATCAGCGCAGTCTCTCCTTCAACATTGCAACATCTGATTTGTGTTCAAACCCAGTGGTTTTCATCAAGGTATGCTTATTCAACCTCTTCCAATGGGCATTCTTTCACCGTCTCATATCTCATTGACACCTGTGGCTTGTCACCCAAACAAGCTGCTTCAGCTTCTAAGCGTGTCAGCTTCGAAACGCCGGATAAGCCTGATTTGGTTATCAATTTCCTTAAAAGTCATGGATTCTCTCAGCCCCAGATTGTTCGTTTCATTGCTGAGATCCCATCGTTTCTCCGATATGATCCTGAGAAAACCTTTCTGCCCAAAATTGAATTTTTCAAATCCAGAGGCGTTTCGAGCTCAGACATCCCTAGGCTCATATGTAGTTGTCCTAGAATCATGTCAAGAAGCTTAAGGAAGCAGCTCATTCCTTCCTTTGACTTCTTTCGAGATGTGTCTCAATCTGACGAGAAGCTTATTAAAACTCTTCAATATTGCTCGGGCATTCTTCTTAACGCCAACACAATTGCCCGGCCTAATATGGAGCTATTGCGAGAAGCAGGAGTTCCTGAATCAAATGTCATCAAATTGTTGCAAGTGTATCCTAGGACATTAACTGCAAGCCCTAATGTGTTTAAGGACATTGTAGAAGAAGTGAAGAATATAGGGATCAATCCTTTGAAGTATCAATTTCTTATGGCTATTCATGTATTCTTCTGTCTAAACAAATCCTCATTGGCAAAGAGAGCTGATGTTTATAAAAAGTGGGGTTGGTCTGACCATGACACTCTTGTGGCAGCAGCAGAGGATAAGATCGATGCAATAATGGAGTTTCTTGTCCATAAATTGGGCTGTGAGTCTTCTACTACTAGCAAATATCCTACAGTTTTTACATTGAGCTTGAAAAGGCGAATAGTTCCGAGAGGTGCTGTCATTCAAGCTCTGTTGTCAAGGGGTCTAATG	981	0.419	MLPSLRKAIGISAVSPSTLQHLICVQTQWFSSRYAYSTSSNGHSFTVSYLIDTCGLSPKQAASASKRVSFETPDKPDLVINFLKSHGFSQPQIVRFIAEIPSFLRYDPEKTFLPKIEFFKSRGVSSSDIPRLICSCPRIMSRSLRKQLIPSFDFFRDVSQSDEKLIKTLQYCSGILLNANTIARPNMELLREAGVPESNVIKLLQVYPRTLTASPNVFKDIVEEVKNIGINPLKYQFLMAIHVFFCLNKSSLAKRADVYKKWGWSDHDTLVAAAEDKIDAIMEFLVHKLGCESSTTSKYPTVFTLSLKRRIVPRGAVIQALLSRGLM	327

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral753g00008	327	SMART	mt_12	166	196	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	SMART	mt_12	130	161	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	SMART	mt_12	94	125	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	SMART	mt_12	201	231	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	SMART	mt_12	293	327	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	Pfam	mTERF	80	260	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	Pfam	mTERF	270	326	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	Gene3D	Transcription termination factor 3, mitochondrial	143	327	IPR038538	-
	Pral753g00008	327	PANTHER	CGI-12 PROTEIN-RELATED	41	326	IPR003690	GO:0003690\|GO:0006355
	Pral753g00008	327	FunFam	Mitochondrial transcription termination factor-like	144	327	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral753g00008	Pral-Chr753	51956	52962	Dispersed/Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Pral753g00008		mTERF	2e-22	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral753g00008	K15031		-	qsa:O6P43_003532	317.005