Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral753g00007 ATGTCGCGTTCTCTCCGCAAAGCTACCGGCGTCAGCGCAATCTCTCCTTTAACATTTCAACATCTGATTTGTGTTCAAACCCAGTGGTTTTCATCGAGGTATGCTTATTCAACCTCTGCCAATGGGCATTCTTTCACCGTCTCATATCTCATTGACACCTGTGGCTTATCACCCAAACAAGCTGCTTCAGCTTCTAAGTGTGTCAGCTTCGAAACGCGGGATAAACCTGATTTGGTTATCAATTTCCTTAAAAGTCATGGATTCTCTCAGCCCCAGATTATTCGCTTCATTACTGACACCCCATCGTCTCTCCGATATGATCCTGAGAAAACCTTTCTGCCCAAAATTGAATTTTTTAAATCCAGAGGCTTTTCGAGCTTGGATATCCCTAAGCTCATATGTAGTTATCCTAGAATCATGTCAAGAAGCTTAAGGAAGCAGCTCATTCCTTCCTTTAACTTCTTTCGAGATGTGTTTCAATCTGACGACAAGCTCATTAAAACTCTTCGAATTTACTCGGGCATTCTTGTTGATGCCAACACAATTGCCCGGCCTAATATGGAGCTATTGCGAGAAGCAGGAGTTCCTGAATCAAATGTCATCAAATTTTTGCAATATAATCCTAGGACATTAACTGCAAGTCCTAATGTGCTTAAGGACATTGTGGAAGAAGTGAATAATATTGGGATCAATCCTTTGAAGTATCAATTTCTTATGGCTGTTCATGTGTTCTTCTGTCTAAGCAAATCCTCATTGGCAAAGAGAGCTGATGTTTATAAAAAGTGGGGTTGGTCTGACCATGACATTCTTGTGGCATTTAGAAAGTTTCCTCTCTGTATGGTAGCAGCAGAGGATAAGATCGATGCAATAATGGAGTTTCTTGTCCATAAATTGGGCTTTGAGTCTTCTACTGTTAGCAAATATCCTACAGTTTTTACAATGAGTTTCAGAAGGCGAATAGTTCCGAGAGGTGCTGTCATTCAAGCTCTGTTGTCAAGGGGTCTAATGAAAAAGAAAACATTGTTAACAAAATTTGTATATAGTGAAAGTTATTTTTTGAGGAAGTTTGTCCTTTGTCATGGGCAGGAAGCTACTGAATTATTAGAGTTGTATCAGTCTAAACTGCATCTTGCAAGGCAAATGAAGAATGGAAAGGTTTGA 1161 0.3979 MSRSLRKATGVSAISPLTFQHLICVQTQWFSSRYAYSTSANGHSFTVSYLIDTCGLSPKQAASASKCVSFETRDKPDLVINFLKSHGFSQPQIIRFITDTPSSLRYDPEKTFLPKIEFFKSRGFSSLDIPKLICSYPRIMSRSLRKQLIPSFNFFRDVFQSDDKLIKTLRIYSGILVDANTIARPNMELLREAGVPESNVIKFLQYNPRTLTASPNVLKDIVEEVNNIGINPLKYQFLMAVHVFFCLSKSSLAKRADVYKKWGWSDHDILVAFRKFPLCMVAAEDKIDAIMEFLVHKLGFESSTVSKYPTVFTMSFRRRIVPRGAVIQALLSRGLMKKKTLLTKFVYSESYFLRKFVLCHGQEATELLELYQSKLHLARQMKNGKV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral753g00007 386 Pfam mTERF 186 352 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 Pfam mTERF 80 229 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 Gene3D Transcription termination factor 3, mitochondrial 162 368 IPR038538 -
Pral753g00007 386 PANTHER CGI-12 PROTEIN-RELATED 42 361 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 130 162 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Pral753g00007 386 FunFam Mitochondrial transcription termination factor-like 144 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral753g00007 Pral-Chr753 43278 46480 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral753g00007 mTERF 9.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral753g00007 K15031 - qsa:O6P43_003532 371.703