LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral746g00002	ATGGAAAATGAGCCTTTGCTCTCATATTACAGTCCCAGAAAGCGTCATCCACCTTCGCATCTCGCGCCTCTGGCGGAGAACGACGAGGTGGTCCTTCCTCTAAACGCATCGGAGATCAAGGAGCGCCTTATCTTCGGGCCGTCGACTCCTGAAGATTCTGCAGCTTTAGTTGAAGCACTCACGCTTTCGCTTAATTCCCCAAGACAGCATTCTTCTTCACACGACCTTTTAGCTGCTCTCCTCGAATCACAATCTCAACTTCCCCGAAAATCATCCTCAAACCCTGCCGTTCGTCGCTGTAAAACGGCACCGGCTATGGCGGTGATCCCCGAATTCAACCACCAGCAATCCTCTGAGCCTAAACCCCAACGTAACTCAAACTCAATTGTTTCCCAAGCGGTTATTCTTCTTGTTATCTATTTATCATTGGGGGTGGTTATATATTCTCTCAATCGTCATAATTTTACTGGAAGTGAGACTAACCCTGTGGTGGATGCCCTCTATTACTGTGTGGTGACAATGTGCACAATAGGATACGGTGACATTACTCCCACTAGTACAGCGACCAAGCTTTTTTCTATTCTGTTTTCGTTGGTGGGATTTGGGTTTATTGACATATTGCTTTGCGGGATGGTGATTCATGTTCTTGATTTGCAAGAGAGTCATTTGCTGAAGACAATGAAGAGATCATATGTAATTGATGCCAAGAAAGGGAGAATGAGGATTAGGATGAAGGTGGCCTTGGCATTGTTGGTTGTGGTGCTTTGTATTGGGGTTGGTGTTTGTGTGATGCATTATGTGGAGAAACTTACATGGGTGGATTCTTTCTATCTTTCTGTGATGTCAGTTACAACTGTTGGCTATGGTGACCAGGCATTCAAATCATTTTCTGGTCGTATCTTTGCGGCAATTTGGTTGCTTTTATCGACTCTTGCAGTTGCTAGGGCTTTTCTTTATTTAGCTGAGGCAAGAGTGGATAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCATGATTTGACTGTTTCTGATTTTTTTGCTGCTGACTTAGACAATAATGGCTGTGTGAGTAAATCAGAATTTGTTATATACAAGCTCAAGGAGATGGGAAAACTGGCAGATAAAGACATCATGCTGGTCGGTGAGAAGTTTGACCGGCTAGATACCGGTAAACGTGGCTATATAAAACTTGCTGATCTCATGGAGGCTAATCTTTGA	1221	0.439	MENEPLLSYYSPRKRHPPSHLAPLAENDEVVLPLNASEIKERLIFGPSTPEDSAALVEALTLSLNSPRQHSSSHDLLAALLESQSQLPRKSSSNPAVRRCKTAPAMAVIPEFNHQQSSEPKPQRNSNSIVSQAVILLVIYLSLGVVIYSLNRHNFTGSETNPVVDALYYCVVTMCTIGYGDITPTSTATKLFSILFSLVGFGFIDILLCGMVIHVLDLQESHLLKTMKRSYVIDAKKGRMRIRMKVALALLVVVLCIGVGVCVMHYVEKLTWVDSFYLSVMSVTTVGYGDQAFKSFSGRIFAAIWLLLSTLAVARAFLYLAEARVDKRNRRMAKWILGHDLTVSDFFAADLDNNGCVSKSEFVIYKLKEMGKLADKDIMLVGEKFDRLDTGKRGYIKLADLMEANL	406

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral746g00002	406	MobiDBLite	consensus disorder prediction	1	21	-	-
	Pral746g00002	406	Gene3D	-	222	337	-	-
	Pral746g00002	406	SUPERFAMILY	EF-hand	337	403	IPR011992	-
	Pral746g00002	406	Pfam	Ion channel	135	208	IPR013099	-
	Pral746g00002	406	Pfam	Ion channel	251	321	IPR013099	-
	Pral746g00002	406	PANTHER	POTASSIUM CHANNEL, SUBFAMILY K	134	378	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Pral746g00002	406	SUPERFAMILY	Voltage-gated potassium channels	229	343	-	-
	Pral746g00002	406	SUPERFAMILY	Voltage-gated potassium channels	129	208	-	-
	Pral746g00002	406	PRINTS	Two pore domain K+ channel signature	172	200	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Pral746g00002	406	PRINTS	Two pore domain K+ channel signature	284	293	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Pral746g00002	406	FunFam	Two-pore potassium channel 3	229	343	-	-
	Pral746g00002	406	ProSitePatterns	EF-hand calcium-binding domain.	350	362	IPR018247	-
	Pral746g00002	406	Gene3D	-	114	221	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral746g00002	Pral-Chr746	30523	33517	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral746g00002	3	405	Ion Channels	AT4G18160	57.343	2.32e-163	464

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral746g00002	K05389		-	qsa:O6P43_012911	523.472