Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral741g00004 ATGGATCTTTCTTTGAGTGTTGGCAGTGGATCTGGCGATGAGCAAAACACTGCAACCTCTCATCAGACTAGAAGGAGGTCTGCTCATCGTCACACTCCTATGCAGATCCAGCGACTTGAAGAGTTTTTCAAGGAGTGCCCACACCCTGATGAGGAACAACGCAGAGATTTAGGCAAGGAACTTGGTCTTGAACCTAAGCAAATCAAGTTCTGGTTTCAGAACAAGAGAACTCAGACCAAGACGCTGAATGAACGGATAGATAACAATGTTCTTCGTGCTGAGAATGAGAGAATTCAGTCTGAGAATTCAGCAATCAAAGAGGCTCTCAAGAGTGTGGCCTGCCCTTCTTGTGGGGGTCCCTCCTATGGAAATGAAGAGCAAAGACTTGCTATGATGAAACTGCTCCAAGAGAATGTCTATCTCAAGCACGAGTATGAAAAAGCGACAAGGCTTGTCGCAGACTATGCTGGGAATCCTCTGATAGTACAAAAGGATTTCCTAACCCTAGGAACTCCATCACCATCATCACAACATGCCATGCCGACCACGTCCATGTCCGATGACAATAGTAACATGTTGCCAAAACAAGGCATCATCAACAAGGCAGTGATGTTGGAGACAGCCATTAGTGCCATTGAAGAATTAATGAGGCTTATGCGTGTGGATGAGCCACTTTGGGTCAAGTCTGAAGCATTTGAGCTCAAGGAAGGCTTCTTTCTCCCTAACCCTGAAACTTATGAAAGGATCTTCCATAGGGCTCATCACCTCCGCAAGAAGCTTAATAATGCTCGTGTTGAGTGTTCTAAAGCTTCCTGTGTCATTAACATGGCTCCTTTGCAATTGGTTGGCATGTTTCTTGACTCTGAGAAATGGGCTAATCTATTCCCAACAATTGTTGGAAAAGCAAGCACATTGAAAGTACTTGAAGCTGGTTCGCTTGGGGGCAGGAATGGAGCCTTGCAGCTAATGCATGAAGAACTTCACATGCTTACAGCTATGGTGCCACCTCGTGAATTTGTGTTCCTTCGAGCTTGTTTCCAACCAGACAAGGCAACATGGGTGATAGGTGATGTGTCGTTTGTGCCCCTCGAGGACATCGGCGACTTTACTTATTCTTCCTCTTGCTGGAAGCTTCCCTCTGGATGCATGATTCAGGAATTGCCCAATGGCTTCTCCAAGGTAACTTGGGTGGAGCATGTGGAAGTGGAACATGAAAGCCTGATAGTGCACATGTTGTATAGAAACCTGGCATTTAGCAGCATTGCTTATGGAGCTGAGCGATGGGTTGTGGCATTAGAGAGAATGTGTGAGAGAATTGGTTACACCGTAAGCCCTCACATTGCTCTTGATGGTGAAGCTGCTTCAGCGATGGGCGTTGTACCTGAAGGAAGAAGAAGCTTGATGAAACTAGGGCATCGCATGATGAAGAGCTTCTGTGGAGTGATGAGCATGAATGAAACATCATGCGAAGAGTTTGAGGAGATAAGTGATGAGAATGAGACTGGAATCAGAATGTTCATTCGTCACAACCTGGAGAGAGGTCAGCCCCATGGCATCGTTCTCACTGCTGCTTCTCCTATTTGGCTCCCTCTTTCTCCCAACCGCATCTTCCACTACCTCCGCGACATCACTCGCCGGTTCCAGTGGGATGTTCTTTGCAATGAAAATGAAGAGCAAGAGGTTGTGCGCATCTCGACTGGAACTCATCCTGGAAACTACATATCAATTATCCAGACACACAATGTGGACGGCAGCGTTGCGATTCTTCAAGAAACTTGTGTGGAGCCGATGGGTTATGTGCTGGTGTTTGCTCCCGTGGATAAGCTGACGATCAATGGGGTGATGCAAGGGGAGGATTCGGCCGCCGTGTCGATACTGCCATCGGGCTTTGTGGTCATGAAGGACGACGTGGGAATATCCAATGGCGGCGGAAAGGACGGTGGTGGTTCATCTCCCGGCGGTGGGTCAATACTGACAATGACTATGCAGATTCTGGTGAGTAGCAGTGTGGAAACGAAGAGCTTGAACAAGAAGAGTGTGGCTACGGTGAACGAACTCGTGAACACCACTCTCAACAAGATCAAGTTTGCTCTGATGAATAATAATTAG 2109 0.4723 MDLSLSVGSGSGDEQNTATSHQTRRRSAHRHTPMQIQRLEEFFKECPHPDEEQRRDLGKELGLEPKQIKFWFQNKRTQTKTLNERIDNNVLRAENERIQSENSAIKEALKSVACPSCGGPSYGNEEQRLAMMKLLQENVYLKHEYEKATRLVADYAGNPLIVQKDFLTLGTPSPSSQHAMPTTSMSDDNSNMLPKQGIINKAVMLETAISAIEELMRLMRVDEPLWVKSEAFELKEGFFLPNPETYERIFHRAHHLRKKLNNARVECSKASCVINMAPLQLVGMFLDSEKWANLFPTIVGKASTLKVLEAGSLGGRNGALQLMHEELHMLTAMVPPREFVFLRACFQPDKATWVIGDVSFVPLEDIGDFTYSSSCWKLPSGCMIQELPNGFSKVTWVEHVEVEHESLIVHMLYRNLAFSSIAYGAERWVVALERMCERIGYTVSPHIALDGEAASAMGVVPEGRRSLMKLGHRMMKSFCGVMSMNETSCEEFEEISDENETGIRMFIRHNLERGQPHGIVLTAASPIWLPLSPNRIFHYLRDITRRFQWDVLCNENEEQEVVRISTGTHPGNYISIIQTHNVDGSVAILQETCVEPMGYVLVFAPVDKLTINGVMQGEDSAAVSILPSGFVVMKDDVGISNGGGKDGGGSSPGGGSILTMTMQILVSSSVETKSLNKKSVATVNELVNTTLNKIKFALMNNN 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral741g00004 702 SUPERFAMILY Homeodomain-like 6 82 IPR009057 -
Pral741g00004 702 SUPERFAMILY Bet v1-like 461 679 - -
Pral741g00004 702 MobiDBLite consensus disorder prediction 1 22 - -
Pral741g00004 702 Gene3D - 252 428 IPR023393 -
Pral741g00004 702 MobiDBLite consensus disorder prediction 1 32 - -
Pral741g00004 702 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Pral741g00004 702 Coils Coil 88 108 - -
Pral741g00004 702 Gene3D - 11 98 - -
Pral741g00004 702 CDD START_ArGLABRA2_like 201 437 - -
Pral741g00004 702 FunFam Homeobox-leucine zipper protein HDG1 11 98 - -
Pral741g00004 702 Pfam START domain 208 438 IPR002913 GO:0008289
Pral741g00004 702 CDD homeodomain 25 80 IPR001356 GO:0003677
Pral741g00004 702 SUPERFAMILY Bet v1-like 203 440 - -
Pral741g00004 702 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 698 IPR042160 -
Pral741g00004 702 ProSiteProfiles START domain profile. 197 441 IPR002913 GO:0008289
Pral741g00004 702 Pfam Homeodomain 25 80 IPR001356 GO:0003677
Pral741g00004 702 SMART HOX_1 24 86 IPR001356 GO:0003677
Pral741g00004 702 SMART START_1 206 438 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral741g00004 Pral-Chr741 69374 76124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral741g00004 24 698 Homeobox Transcription Factor Family AT1G73360 40.935 4.56e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral741g00004 START 8.5e-30 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral741g00004 K09338 - rcu:8266520 636.336