Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral740g00015 ATGGCGTCGTCCCAGGTTGAAATTGCTCTAACATCGCCTTTTGGTTGTGTTCTGAGAAAATATAATCATCATCGTGAGAGATGCAGGGAAAGTACTTCTCGAGTTTCTTCATCACAAGGAACAACTTTCCACCAGAACGATAATGACAGAAGCAGCTTTGTGGTCGGAGATCATCATGTAGCAGCACGAATTGACGTTGTTAAGAACATGAATAACAGCAACGTGAATAATGATGCTAAGAACAGCAACGTAGGATTGACGAAGAAGGAAAAAGAAGATGAATCCTTATCCTCGTCGAATGAGAACAACAACAACGACCCTAATAGGCAATCACAAATTCTGGATCGATGGGCTGCAAGAAAAGCTAAAGAAATGGTATCAACAATTGAGACAGAAGCTGAACTTTTGGAGAATCTGGGTAATTCTTCTTCAGCTTCGTCATTATCGTCATTATCAGAAACAACATTGAATAATCGTGGAGCTTCGTCTCTTGTTCAAATATGGGAAAAGAGGTTGAATAACCTGAACCACCAACCACTAAAGTGCAATACAACAAGCAGGACATCATCGCTTGGGTCATCAGATGTTGGAGAACTCATGGATGAATCATCATCATCATCATTGTACTCAGATTGGGTAGGACCAACAAGTACTGATACAAACGAAGCTGCATCATCATGTTCAACCCCAAAAGTGGCAGATATCATCAAGAGATTGAAGGAGAATAAATATGGAGATCAACAAGGACAACACACAAGCGTGGTGCTTCATCATGTGGCGAGTTCGCCTCGCTTCCGAGGCCGTCGAGCACTCACAGATTTGCTTATGCAGATGGAACGTGACAGACATGGAGAGCTCAATAATTTGGCTCAGCTTGCACCTGTTTCCAACTTTTCACAAAGAGGTCGAGGTCGTATTCAGTCACTCTTGCGGCTTAGATTATTAAAACGACACCATGAATCAACAACATATGAAAAGAAGAGACAACCAAAAGGGTCCACAATTATGCACCTAAGGGAAAGATTTAATGTAGAAGTAAAACAAGGAAGTACAACTCAGCCAGAAATAGATAATTCAAGAAATACCCACCTTAATCAACCCGAAAGCCCTATTCCTGTTCATAACCCCATTGGCGAGCACAGGTCGAACCCGATCGGGTCAGACCCGGAGGTCAACATGACAAATGGCTGCCAAAATGACAATGATGACGATGCATATGATCACACAGAAGCATGTGCTCATAAACCAGAAGAAGAAGAAGTCAGTGCAAGTTCAGAAACAGTATGCTTGGAGGCTCAGAACAATATTGCATCACATGAAGTTGGCGAGACAAGAACTTGCTATATGGTTGAATCAGATGCAAATCATGAGACAAAAGAAGAAGCAGAGCTGGCAGAGGTAAAGCAGGATCATAGTGCTGAAACCGAAATCAATTATGTGGATAATGGAACAATAACGAATACTGAAGATCAAGATGAACATGCAAGTGATGAAGGGGAAGATTATGATGATGTTGATGATGATGACCGTAATGATGACGACGAACATTATTATGATTGGATCAGTCCTATTGCTCGCCCCAGAAGCTACTGGGAAGATCGTAGGCAAGCCTGGTACAAGGAGATGCTTGACACTGCTTCTTCTGATAAAAGAGAGATACGTCAACTTCTTGAACGAAGAACAGTTTCAACTTTCCTTTCAAGTGACTTCAGAGAGAGAATGGACAAATTGATGGAATACCACATAGGTTCACAAACACATTTTATCAGTAGCCAAGAAGATGATGAAGACAATGGAGGAAGAATGGGCCAACTAGTGTCATTTTCGGAACAACATATACAGCGCCGTGGTCATAACCTAGAAGAAGCTGAAAAACAAGAAGAGGTACAAAAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGATGTTGAGTAATAACAATGGAGGTTATAATGAAACCAGTGATGATGGCAGTCAATCATCATCGTCAACAAATAATCTTATTTCCTCTTCTCCAAATATGTCATCATGGAGCTATAGAGACAACGAAGCTGCCAGTGATGATTCTGAAGACAGAGTTGATGAGTCTACTACATCATCTTCAACACAGCCTTCTCAATCTCCTACTCGCCAGTGCATTAATCCTCATTCAGTGGAAATGGATCTGATATGTGATATGAGAGGGCAAATGGAGCAACTATACAGAGAAATGGCTGAGATTAGAAAATCACTAAAGACCTGCATAGATATGCAGATGATGCTACAAAAATCAATGAAACGCGATCCACCAAAGAAAGGCAATTGTTGTATCTGCTATGAGAAGAAAGTCGACTCACTTTTATACAGATGTGGGCACATGTGTACGTGTATGAAGTGTGCAAATGAGTTGCAATGGAACAGCGGCAAGTGTCCAATATGTCGAGCTCCCATAGCTGATGTTGTGAGAGTTTATGTGGATGCATAG 2466 0.4157 MASSQVEIALTSPFGCVLRKYNHHRERCRESTSRVSSSQGTTFHQNDNDRSSFVVGDHHVAARIDVVKNMNNSNVNNDAKNSNVGLTKKEKEDESLSSSNENNNNDPNRQSQILDRWAARKAKEMVSTIETEAELLENLGNSSSASSLSSLSETTLNNRGASSLVQIWEKRLNNLNHQPLKCNTTSRTSSLGSSDVGELMDESSSSSLYSDWVGPTSTDTNEAASSCSTPKVADIIKRLKENKYGDQQGQHTSVVLHHVASSPRFRGRRALTDLLMQMERDRHGELNNLAQLAPVSNFSQRGRGRIQSLLRLRLLKRHHESTTYEKKRQPKGSTIMHLRERFNVEVKQGSTTQPEIDNSRNTHLNQPESPIPVHNPIGEHRSNPIGSDPEVNMTNGCQNDNDDDAYDHTEACAHKPEEEEVSASSETVCLEAQNNIASHEVGETRTCYMVESDANHETKEEAELAEVKQDHSAETEINYVDNGTITNTEDQDEHASDEGEDYDDVDDDDRNDDDEHYYDWISPIARPRSYWEDRRQAWYKEMLDTASSDKREIRQLLERRTVSTFLSSDFRERMDKLMEYHIGSQTHFISSQEDDEDNGGRMGQLVSFSEQHIQRRGHNLEEAEKQEEVQKEEEEEEEEEEEMLSNNNGGYNETSDDGSQSSSSTNNLISSSPNMSSWSYRDNEAASDDSEDRVDESTTSSSTQPSQSPTRQCINPHSVEMDLICDMRGQMEQLYREMAEIRKSLKTCIDMQMMLQKSMKRDPPKKGNCCICYEKKVDSLLYRCGHMCTCMKCANELQWNSGKCPICRAPIADVVRVYVDA 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral740g00015 821 ProSiteProfiles Zinc finger RING-type profile. 769 808 IPR001841 -
Pral740g00015 821 MobiDBLite consensus disorder prediction 179 228 - -
Pral740g00015 821 SUPERFAMILY RING/U-box 768 813 - -
Pral740g00015 821 Coils Coil 615 647 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 697 713 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 620 713 - -
Pral740g00015 821 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 750 821 IPR013083 -
Pral740g00015 821 MobiDBLite consensus disorder prediction 67 111 - -
Pral740g00015 821 CDD mRING-HC-C3HC5_NEU1 766 818 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 454 516 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 67 83 - -
Pral740g00015 821 Coils Coil 119 139 - -
Pral740g00015 821 PANTHER BNAC05G24000D PROTEIN 1 820 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 347 377 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 627 644 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 645 683 - -
Pral740g00015 821 Pfam Zinc finger, C3HC4 type (RING finger) 766 814 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 454 475 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 347 369 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 29 51 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 33 50 - -
Pral740g00015 821 MobiDBLite consensus disorder prediction 493 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral740g00015 Pral-Chr740 123582 127327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral740g00015 769 817 C3H Transcription Factor Family AT3G06140 42.857 2.68e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral740g00015 - - pcin:129304584 865.914