Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral722g00002 CACAACATCTCCTCCTCCGCCCTACTACTACACACAACACCTCCTGCTACTCCCTCCCTCCAGGTTACTCCTCCGCCAGCCACACCCACTCCCAGCCCTCCCTTTCCCTCCCCACCTGCAACCTCGCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCACCTCCGGTGACTCGCAGCTCGCCTCCTCCTCCTCCGTCCAGTTCAACCACGCCTTCGTCCCCTTCTTCATCGCCGGATATATCAACTGGTGTTATTGTTGGCATCGCCGTTGGTGCTGTGGGGATTCTTGTAATTTTAAGCCTTGTTTGCGTATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGTGGGATCCTATGTGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCTACCACGTCAGTGGCAGCATAATGCTCCGTCTCCTTCAGATAATATTGTCTCCGTGATGCAAAAGCCCCCGCCCCCGGCTTATGCCCCTAAACTTCCTCCTTCGCCGCCATTTCTCGGCAGCAGTGGTGGGTCAGGTTCCAACTATACAGGTGGCGAAAATTCTCACCCACCTCCTTCTCCTGGAATGTCATTGGGTTTCTCAAAGAGCGCATTTTCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAGGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGTGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGACATCTCGTTTCTCTCGTTGGGTACTGCATTACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAATACGTTGGAGCTTCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCCAAGATCATCCATCGTGATATCAAAAGTGCTAACATACTTCTGGATTTCAAGTTTGAAGCGAAGGTTGCTGATTTTGGACTAGCAAAGTTTTCTTCTGATCTCAATACTCATGTTTCCACTCGAGTGATGGGAACTTTTGGTTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCTTTTGGGGTGATGCTCCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGAGTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTCTGGTTGATCCAAGGCTGAAAGATGAATATGACCTCAATGAAATGACTCGCCTGGTCGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGCTCGTGCTCTGGAAGGAGACATGTCTCTATCAGATCTGAACGAAGGAATTAAACCCGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGATACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTTGGCGTCAGCAGTGAATACAGTGCACCTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCGGGACCACCCGGGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1770 0.4955 HNISSSALLLHTTPPATPSLQVTPPPATPTPSPPFPSPPATSPPPPTSGTNSPPPPVTRSSPPPPPSSSTTPSSPSSSPDISTGVIVGIAVGAVGILVILSLVCVCCRRKKRRTSNVGSYVPPQGPKGDQYGGLPRQWQHNAPSPSDNIVSVMQKPPPPAYAPKLPPSPPFLGSSGGSGSNYTGGENSHPPPSPGMSLGFSKSAFSYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLELHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHTFMEDSLVEWARPLLIRALEEHDFDSLVDPRLKDEYDLNEMTRLVACAAACTRHSARHRPKVSQVARALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSAPTSDNSLYPSGSSSEGQSRGTTREMEMRKMNNHQGYSGSS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral722g00002 589 SUPERFAMILY Protein kinase-like (PK-like) 190 490 IPR011009 -
Pral722g00002 589 MobiDBLite consensus disorder prediction 543 589 - -
Pral722g00002 589 MobiDBLite consensus disorder prediction 543 569 - -
Pral722g00002 589 ProSiteProfiles Protein kinase domain profile. 217 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral722g00002 589 MobiDBLite consensus disorder prediction 18 72 - -
Pral722g00002 589 MobiDBLite consensus disorder prediction 156 170 - -
Pral722g00002 589 FunFam Proline-rich receptor-like protein kinase PERK1 293 501 - -
Pral722g00002 589 MobiDBLite consensus disorder prediction 137 151 - -
Pral722g00002 589 PRINTS Proline rich extensin signature 138 163 - -
Pral722g00002 589 PRINTS Proline rich extensin signature 13 34 - -
Pral722g00002 589 PRINTS Proline rich extensin signature 62 79 - -
Pral722g00002 589 PRINTS Proline rich extensin signature 40 56 - -
Pral722g00002 589 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 550 IPR047117 -
Pral722g00002 589 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Pral722g00002 589 SMART serkin_6 217 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral722g00002 589 Gene3D Transferase(Phosphotransferase) domain 1 293 501 - -
Pral722g00002 589 FunFam proline-rich receptor-like protein kinase PERK1 195 292 - -
Pral722g00002 589 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Pral722g00002 589 MobiDBLite consensus disorder prediction 114 197 - -
Pral722g00002 589 MobiDBLite consensus disorder prediction 1 17 - -
Pral722g00002 589 MobiDBLite consensus disorder prediction 173 190 - -
Pral722g00002 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Pral722g00002 589 MobiDBLite consensus disorder prediction 1 80 - -
Pral722g00002 589 Gene3D Phosphorylase Kinase; domain 1 195 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral722g00002 Pral-Chr722 11313 15284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral722g00002 56 572 Trihelix Transcription Factor Family AT1G70460 50.962 3.93e-166 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral722g00002 PK_Tyr_Ser-Thr 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral722g00002 - - gmx:100781944 784.252