Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral720g00001 ATGGCTGAGACTTCTGGAACTAAAGGAACCCACGAGGTTGTTCTTACTGTCAATAATGACAAATCTAATGAAGGCTCCATCATCTTTGTCTCTATCCCTTTCTTACAGAAGATGGTGGCAGAGTTGGTGGGGACATACTTTCTAATATTTATTGGGGGTGCATCAATAGTGGTGAACATTAACAACAACAACGTCGTAACGCTTCCTGGGATTGCCATCGTTTGGGGTCTTCTCGTCATGGCTCTTGTCTATTCTCTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCCGTCACTCTCGCTTTTGCTTCCACTAAACGATTTCCCCTCAAACAGGTGCCAGCTTATATATTAATTCAGGTTTTAGGATCCACTCTTGCAAGTGTGACTCTCAGACTGGTCTTCACAGGAAAACATGACCAATTCATAGGAACATTATTATCTGGGTCGTATCTTCAGGGCTTTGTGGTTGAATTCTTAATCACCTTCTACCTCATGTTTGTCATCTCTGGTGTGGCAACTGATGGCAGAGCGATTGGTGAGCTGGCTGGGATTGTCGTAGGGGCAACCGTAATGCTTATTGTGTTGTCCGCCGGGCCGGTAACAGGATCGTCAATGAACCCGGCGAGAAGCCTAGGGCCAGCAATTGTGTGGCACGAGTATAGAGGAATATGGGTGTATATGATAGCACCAGTGGGGGGAGCAATAGCAGGGGCATGGGTATACAACATCATGAGGTATACAAACAAGCCAGTGCATGAGATCACAGCAAAGAGCGCTTCTTTCCTCAAATCTTCAAGCTGTTGTGGTGCCTCCAACTGA 822 0.4623 MAETSGTKGTHEVVLTVNNDKSNEGSIIFVSIPFLQKMVAELVGTYFLIFIGGASIVVNINNNNVVTLPGIAIVWGLLVMALVYSLGHISGAHFNPAVTLAFASTKRFPLKQVPAYILIQVLGSTLASVTLRLVFTGKHDQFIGTLLSGSYLQGFVVEFLITFYLMFVISGVATDGRAIGELAGIVVGATVMLIVLSAGPVTGSSMNPARSLGPAIVWHEYRGIWVYMIAPVGGAIAGAWVYNIMRYTNKPVHEITAKSASFLKSSSCCGASN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral720g00001 273 PANTHER AQUAPORIN NIP2-1 23 260 IPR034294 -
Pral720g00001 273 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Pral720g00001 273 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Pral720g00001 273 Gene3D Glycerol uptake facilitator protein. 13 258 IPR023271 -
Pral720g00001 273 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral720g00001 273 Pfam Major intrinsic protein 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral720g00001 Pral-Chr720 19071 22025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral720g00001 36 265 Major Intrinsic Protein MIP AT5G37820 59.130 8.55e-92 272