Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral715g00001 ATGCCACGTATATCACTCCTAAGACATTTGAATGATGGAACCGATAGGTGGCACATAGTTGCAAGAGTTTTCAGGAAATGGAATGTCTTCCATAAGGGATCATCTGCTGATATCTTCTGCGTGACAATGGTTTTATTAGACAAAGAGGGGGATAAAATACAAGCAAGTGTTCTAACCAAAAGTTTACATGACAAGTTTCGCCACAGTATCATTGAAGGAGAGACTTATTTCTTTGCTAATTTTGAGGTCTCTGCTAATGTTAGCCAATATAGAGCTACCACTCATCCTTTCAAGATCACTATAACTCCACGAACACATGTTGCTGAGAAAATAGCCATTGTGCCATCTTATTCCTACTCTTTCTTTCCACTTGCTGAGATAGAGAAACTCAATGAGAAGCATAATATTGAATACTTGATAGAATATCGGCGGGACAATGAAACCAAGAATAAATTGAGGATGGTGCTGAGTGACATTGAGTACAGAACCTTTCACGGAATCAATGTAGAATGTATATTATTTGATGAATGTGCCAGCGATGCTTTCATGTCTCAGCTCCAGAATACACAGACACCTGTTGTGGTGTTGTTAAACCTGGCTAGGGTTGGTTTTTCAGAAGATGGAAGAGCACAGGTTTGCAATTCTTTTAATGCCACAAGGGTGTTTTTCAACCCACCCATCAAGGAAGTGCAACTAATGATTGATAGTTCAAAAGACAATGGCTCTCCAAGTTTGTCCTTCCTTAGCCAGCCCGTACTAACTCCACTGAGTCAACAGTCACGTACTAGCATCAATTGCAACCAAAGCCCGATTGCTATATCAAACATAAAAGATCAACCCATGGGAGAAACTTTTGTCATTAGGTGCATTATTCAAAAGTTAGAGACCAGATATGGTTGGATCTATCAAGGTTGCTCCAAGTGTGGTACAAAGCTTCGTTTAGAGAATGAGAGTTGGATATGCCCATCATGTCAGAAGAAACCAGAGTTTATTGACCACAAGATGAAGCTTCATTACACTGTGAAAGATGAGACAGGAATTGCTTCAATAATATTCTGGGATAAACTTGCGGTTGAGTTAATTAAAAATTCAGCCGCTGAGTTGAAGGTTATTCTAGATGAGGATCCTGAGGAAGTTGATTTCCCCAAAAATCTGGACAATCCTGTTGGGAAGAGTATGTTGTTGACTCTTAAACTGAATGACTACAATAAACGACATCCAAGTTCCAGTATTAGTGTGATGCAATATCATTTATGTGAAGATTTAATGGATCAATTTACTGAGGCATCCATTGAGTATTCACAACCTGCTGTGGAACAAAGTCAGGAACATATGAATGTTACTCAAGGAGTTCCTCTAATTGCGGAAAAAGATTTAGTTTCACAATGTGTTGCTGAAGAGGATGTCACACTTTCAAATATGGTCAACCGTGTTAAAGCTCCTCCAGTTAAAGGGAGAAAAAGAAGCGTCGTGAGGAAGAATGTTGAGGATGCTATTGCTGAGGGTACTAACACTGGATCAAGCTCAAGTAATGAACAGAAGCATGTGAAAACTATCAAGTTGGAGAAGTAG 1572 0.3931 MPRISLLRHLNDGTDRWHIVARVFRKWNVFHKGSSADIFCVTMVLLDKEGDKIQASVLTKSLHDKFRHSIIEGETYFFANFEVSANVSQYRATTHPFKITITPRTHVAEKIAIVPSYSYSFFPLAEIEKLNEKHNIEYLIEYRRDNETKNKLRMVLSDIEYRTFHGINVECILFDECASDAFMSQLQNTQTPVVVLLNLARVGFSEDGRAQVCNSFNATRVFFNPPIKEVQLMIDSSKDNGSPSLSFLSQPVLTPLSQQSRTSINCNQSPIAISNIKDQPMGETFVIRCIIQKLETRYGWIYQGCSKCGTKLRLENESWICPSCQKKPEFIDHKMKLHYTVKDETGIASIIFWDKLAVELIKNSAAELKVILDEDPEEVDFPKNLDNPVGKSMLLTLKLNDYNKRHPSSSISVMQYHLCEDLMDQFTEASIEYSQPAVEQSQEHMNVTQGVPLIAEKDLVSQCVAEEDVTLSNMVNRVKAPPVKGRKRSVVRKNVEDAIAEGTNTGSSSSNEQKHVKTIKLEK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral715g00001 523 Gene3D - 256 425 IPR012340 -
Pral715g00001 523 MobiDBLite consensus disorder prediction 485 523 - -
Pral715g00001 523 MobiDBLite consensus disorder prediction 500 514 - -
Pral715g00001 523 SUPERFAMILY Nucleic acid-binding proteins 6 109 IPR012340 -
Pral715g00001 523 SUPERFAMILY Nucleic acid-binding proteins 271 399 IPR012340 -
Pral715g00001 523 CDD RPA1_DBD_A_like 19 107 - -
Pral715g00001 523 Pfam Replication factor-A C terminal domain 285 380 IPR013955 -
Pral715g00001 523 Pfam Domain of unknown function DUF223 43 121 IPR003871 -
Pral715g00001 523 PANTHER OS03G0429900 PROTEIN 6 448 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral715g00001 523 Gene3D - 114 244 IPR012340 -
Pral715g00001 523 Gene3D - 3 109 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral715g00001 Pral-Chr715 22484 25065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral715g00001 3 368 Core DNA Replication Machinery Family AT2G06510 20.812 2.24e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral715g00001 - - pcin:129290097 458.373