Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral712g00002 ATGTCAACTTCGCCGTCTCCCGGAGCTTCTCCGGCCCCCACCTCGCCGCCGTCCACTAACACAACTTCTCCTCCTCCGCCTACTACTAACACAACATCTCCTCCTCCGCCTACTACTAACACAACATCTCCTCCTCCGCCCTCGGCCACCCCTCCTGCAACACCTCCTGCTACTCCCTCCACTCCACCACAGGTTACTCCTTCGCCCCCGCCGCCAGCCACACCCACTCCCAGCCCTCCCTTTCCCTCCCCACCTGCAACCTCGCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCACCTCCGGTGACTCGCAGCTCGCCTCCTCCTCCTCCGTCCAGTTCAACCACGCCTTCGTCCCCTTCTTCATCGCCGGATATATCAACTGGTGTTATTGTTGGCATCGCCGTTGGTGCTGTGGGGATTCTTGTAATTTTAAGCCTTGTTTGCGTATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGTGGGATCCTATGTGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCTACCACGTCAGTGGCAGCATAATGCTCCGTCTCCTTCAGATAATATTGTCTCCGTGATGCAAAAGCCCCCGCCCCCGGCTTATGCCCCTAAACTTCCTCCTTCGCCGCCATTTCTCGGCAGCAGTGGTGGGTCAGGTTCCAACTATACAGGTGGCGAAAATTCTCACCCACCTCCTTCTCCTGGAATGTCATTGGGTTTCTCAAAGAGCGCATTTTCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAGGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGTGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGACATCTCGTTTCTCTCGTTGGGTACTGCATTACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAATACGTTGGAGCTTCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCCAAGATCATCCATCGTGATATCAAAAGTGCTAACATACTTCTGGATTTCAAGTTTGAAGCGAAGGTTGCTGATTTTGGACTAGCAAAGTTTTCTTCTGATCTCAATACTCATGTTTCCACTCGAGTGATGGGAACTTTTGGTTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCTTTTGGGGTGATGCTCCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGAGTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTCTGGTTGATCCAAGGCTGAAAGATGAATATGACCTCAATGAAATGACTCGCCTGGTCGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGCTCGTGCTCTGGAAGGAGACATGTCTCTATCAGATCTGAACGAAGGAATTAAACCCGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGATACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTTGGCGTCAGCAGTGAATACAGTGCACCTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCGGGACCACCCGGGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1908 0.5058 MSTSPSPGASPAPTSPPSTNTTSPPPPTTNTTSPPPPTTNTTSPPPPSATPPATPPATPSTPPQVTPSPPPPATPTPSPPFPSPPATSPPPPTSGTNSPPPPVTRSSPPPPPSSSTTPSSPSSSPDISTGVIVGIAVGAVGILVILSLVCVCCRRKKRRTSNVGSYVPPQGPKGDQYGGLPRQWQHNAPSPSDNIVSVMQKPPPPAYAPKLPPSPPFLGSSGGSGSNYTGGENSHPPPSPGMSLGFSKSAFSYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLELHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHTFMEDSLVEWARPLLIRALEEHDFDSLVDPRLKDEYDLNEMTRLVACAAACTRHSARHRPKVSQVARALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSAPTSDNSLYPSGSSSEGQSRGTTREMEMRKMNNHQGYSGSS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral712g00002 635 SUPERFAMILY Protein kinase-like (PK-like) 236 536 IPR011009 -
Pral712g00002 635 MobiDBLite consensus disorder prediction 160 243 - -
Pral712g00002 635 MobiDBLite consensus disorder prediction 1 126 - -
Pral712g00002 635 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Pral712g00002 635 MobiDBLite consensus disorder prediction 219 236 - -
Pral712g00002 635 MobiDBLite consensus disorder prediction 9 118 - -
Pral712g00002 635 PRINTS Proline rich extensin signature 35 47 - -
Pral712g00002 635 PRINTS Proline rich extensin signature 10 26 - -
Pral712g00002 635 PRINTS Proline rich extensin signature 51 72 - -
Pral712g00002 635 Gene3D Phosphorylase Kinase; domain 1 241 338 - -
Pral712g00002 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Pral712g00002 635 Gene3D Transferase(Phosphotransferase) domain 1 339 547 - -
Pral712g00002 635 Pfam Protein tyrosine and serine/threonine kinase 268 535 IPR001245 GO:0004672|GO:0006468
Pral712g00002 635 MobiDBLite consensus disorder prediction 589 615 - -
Pral712g00002 635 MobiDBLite consensus disorder prediction 589 635 - -
Pral712g00002 635 ProSiteProfiles Protein kinase domain profile. 263 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral712g00002 635 MobiDBLite consensus disorder prediction 202 216 - -
Pral712g00002 635 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 141 596 IPR047117 -
Pral712g00002 635 FunFam Proline-rich receptor-like protein kinase PERK1 339 547 - -
Pral712g00002 635 SMART serkin_6 263 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral712g00002 635 MobiDBLite consensus disorder prediction 183 197 - -
Pral712g00002 635 FunFam proline-rich receptor-like protein kinase PERK1 241 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral712g00002 Pral-Chr712 629 4775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral712g00002 102 618 Trihelix Transcription Factor Family AT1G70460 50.962 3.04e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral712g00002 PK_Tyr_Ser-Thr 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral712g00002 - - gmx:100781944 784.252