Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral712g00001 ATGTCAACTTCGCCGTCTCCCGGAGCTTCTCCGGCCCCCACCTCGCCGCCGTCCACTAACACAACTTCTCCTCCTCCGCCTACTACTAACACAACATCTCCTCCTCCGCCCTCGGCCACCCCTCCTGCAACACCTCCTGCTACTCCCTCCACTCCACCACAGGTTACTCCTTCGCCCCCGCCGCCAGCCACACCCACTCCCAGCCCTCCCTTTCCCTCCCCACCTGCAACCTCGCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCACCTCCGGTGACTCGCAGCTCGCCTCCTCCTCCTCCGTCCAGTTCAACCACGCCTTCGTCCCCTTCTTCATCGCCGGATATATCAACTGGTGTTATTGTTGGCATCGCCGTTGGTGCTGTGGGGATTCTTGTAATTTTAAGCCTTGTTTGCGTATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGTGGGATCCTATGTGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCTACCACGTCAGTGGCAGCATAATGCTCCGTCTCCTTCAGATAATATTGTCTCCGTGATGCAAAAGCCCCCGCCCCCGGCTTATGCCCCTAAACTTCCTCCTTCGCCGCCATTTCTCGGCAGCAGTGGTGGGTCAGGTTCCAACTATACAGGTGGCGAAAATTCTCACCCACCTCCTTCTCCTGGAATGTCATTGGGTTTCTCAAAGAGCGCATTTTCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAGGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGTGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGACATCTCGTTTCTCTCGTTGGGTACTGCATTACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAATACGTTGGAGCTTCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCCAAGATCATCCATCGTGATATCAAAAGTGCTAACATACTTCTGGATTTCAAGTTTGAAGCGAAGGTTGCTGATTTTGGACTAGCAAAGTTTTCTTCTGATCTCAATACTCATGTTTCCACTCGAGTGATGGGAACTTTTGGTTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCTTTTGGGGTGATGCTCCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGAGTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTCTGGTTGATCCAAGGCTGAAAGATGAATATGACCTCAATGAAATGACTCGCCTGGTCGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGCTCGTGCTCTGGAAGGAGACATGTCTCTATCAGATCTGAACGAAGGAATTAAACCCGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGATACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTTGGCGTCAGCAGTGAATACAGTGCACCTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCGGGACCACCCGGGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1878 0.5059 MSTSPSPGASPAPTSPPSTNTTSPPPPTTNTTSPPPPSATPPATPPATPSTPPQVTPSPPPPATPTPSPPFPSPPATSPPPPTSGTNSPPPPVTRSSPPPPPSSSTTPSSPSSSPDISTGVIVGIAVGAVGILVILSLVCVCCRRKKRRTSNVGSYVPPQGPKGDQYGGLPRQWQHNAPSPSDNIVSVMQKPPPPAYAPKLPPSPPFLGSSGGSGSNYTGGENSHPPPSPGMSLGFSKSAFSYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLELHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHTFMEDSLVEWARPLLIRALEEHDFDSLVDPRLKDEYDLNEMTRLVACAAACTRHSARHRPKVSQVARALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSAPTSDNSLYPSGSSSEGQSRGTTREMEMRKMNNHQGYSGSS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral712g00001 625 MobiDBLite consensus disorder prediction 150 233 - -
Pral712g00001 625 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 131 586 IPR047117 -
Pral712g00001 625 FunFam proline-rich receptor-like protein kinase PERK1 231 328 - -
Pral712g00001 625 MobiDBLite consensus disorder prediction 209 226 - -
Pral712g00001 625 MobiDBLite consensus disorder prediction 1 116 - -
Pral712g00001 625 PRINTS Proline rich extensin signature 54 79 - -
Pral712g00001 625 PRINTS Proline rich extensin signature 11 27 - -
Pral712g00001 625 PRINTS Proline rich extensin signature 33 50 - -
Pral712g00001 625 MobiDBLite consensus disorder prediction 579 605 - -
Pral712g00001 625 Gene3D Phosphorylase Kinase; domain 1 231 328 - -
Pral712g00001 625 MobiDBLite consensus disorder prediction 579 625 - -
Pral712g00001 625 MobiDBLite consensus disorder prediction 9 108 - -
Pral712g00001 625 SMART serkin_6 253 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral712g00001 625 Gene3D Transferase(Phosphotransferase) domain 1 329 537 - -
Pral712g00001 625 ProSiteProfiles Protein kinase domain profile. 253 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral712g00001 625 MobiDBLite consensus disorder prediction 192 206 - -
Pral712g00001 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Pral712g00001 625 Pfam Protein tyrosine and serine/threonine kinase 258 525 IPR001245 GO:0004672|GO:0006468
Pral712g00001 625 FunFam Proline-rich receptor-like protein kinase PERK1 329 537 - -
Pral712g00001 625 ProSitePatterns Protein kinases ATP-binding region signature. 259 281 IPR017441 GO:0005524
Pral712g00001 625 MobiDBLite consensus disorder prediction 173 187 - -
Pral712g00001 625 SUPERFAMILY Protein kinase-like (PK-like) 226 526 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral712g00001 Pral-Chr712 629 4775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral712g00001 92 608 Trihelix Transcription Factor Family AT1G70460 50.962 4.83e-167 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral712g00001 PK_Tyr_Ser-Thr 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral712g00001 - - gmx:100781944 784.252