Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral70g00029 ATGTACCCGAAACGGTCTAACCAAGGTGATGGACCTGTTTCCAGACCAGTGCGCACTAGTGATAGGATCAAGACAAGGCCAAACATCTATGGTCGACCGTACTTGTATTACAGTTCAAAGCACACGAGGAAAAGCAAGAACAAGACAAGGACAGCTGCTTCACAAATTGCCAAGATGTTGCGGCCAAGGGATCGTCTAGCACAAGATTCAAATGCTTCTAATTCTGCAGCGACCAATCTTCGACGCTCAACGAGGAAGAGAAGGATTTCTGTTAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCAACATATCAACAACCTAGAAAGCAGATTGACCAAAGTGTGAGTCAGGATGAAGTGAGGTCTCGCAAGCACAAAAAAGTTGTGGAAACTAAACCAAACCCTCGGCGTGAAGGTCTGCGGCCTCGTCGTTCAAAGGTGGTTGTAAGAGAACCCTTGAATTCAGAATCTGATGATGAGCGAGATTTTTCAGAAGAGAAGGTTGGACAGGATGAAACAGAAAATGGGAATGATTTGGATGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGTGAGGATGAGGATGAGGATGAGGATGAGGGAGATGAAGATGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGACCTTCGAAATCGTGCAGATGTTCGCAGGTTCTCAATGGAAGAAGGGAAGGCCCAACCAAGGTCACCCCGAAGGGTGTTACATCAAGGTATGGGCACTAAGGTTGGCAGGGATGTCAGGAAGGGCGGATCAAGAGTTCACAAGCGTTATCGTTTAGCAAGACCTGAAGATTCTGATGATTCTATTCTTGTGGATGAGCTGGATCAAGGCCCTGCTATTCCATGGGGTAGAGGTGGCAGCCGGTCTGGCCCACCTTGGCTTTTTGGTGGACTAGACATGCATGGAACAACAGCATGGGGATTGAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTTTGGCTACATTGACGTCTGGGATTCAATCTGCTGGACCAAGCTCTAAAGGAGGCGCAGACATTCAACCCTTACAGGTTGATGATAGTGTTAGTTTTGATGACATAGGTGGGCTCTCTGAATATATTGATGCTCTAAAGGAAATGGTTTTCTTTCCTTTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACTCCACCTAGAGGGGTGTTGTTGTGTGGGCCCCCTGGCACAGGTAAAACATTAATTGCTAGAGCTTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTACTGAGCAAATGGGTTGGTGAGGCTGAAAGACAATTAAAATTACTCTTTGAGGAAGCACAAAAGAATCAACCTTCTATTATTTTCTTTGATGAAATAGATGGACTTGCTCCTGTGAGATCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCCACATTGCTTGCTTTGATGGATGGTCTTGACTCTCGTGGACAAGTTGTTTTAATAGGAGCAACCAATAGGATTGATGCTATTGATGGGGCCTTGCGTCGGCCCGGAAGATTTGATAGGGAATTCAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTGGACATTCATACTCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAGAGGGAGCTTGCAGCTAGTTGTGTAGGATATTGTGGTGCTGATCTTAAGGCTCTTTGTACTGAAGCTGCCATTCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTTGATTCAGTCATGGTAGAAAAGTATCACTTTATTGACGCAATGTCGACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTACATGCTAGGCCTTTGTCTCTGGTTGTTCAACCATGCCTACAAAGACATCTACAGGAAGCCATGAAAATTATATCTGATATTTTTCCTCAAGTTGCTGTTGCATCAGAATTGTCCAAACTCTCTATGCTTTCCTATGGTTCTGCAATTCCACTTGTCTATCGGCCCAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGGCTGGACCATCTTGGGCCTGCAGTTTTGCATGAACTGGAAAAATTTCCTGTTCATTCGTTAGGACTTCCATCTCTCCTATCGGATCCTAGTGCTAAGACGCCAGAGGAGGCTCTAGTTCATATATTTGGTGAAGCTAGAAGAACAACCCCATCTATTCTCTATTTACCACAGTTCAATGTTTGGTGGGAAACTGCACACGAACAGCTCAGGGCTGTTATCCTGACTTTGCTAGAAGAACTGCCTTCCGACATCCCTATTTTATTACTTGGAACATCATCAGTGCCGTATGAAGAAGTTGATGAAGTGCCTCCTTCATTGTTTCCTTACCGTTCAGTCTATAACATGAACATGCCATCTGCTGAAGACAGAACATCATTTTTCAATTGTTTGATCGATGTTGCTTTATCAGTCTCATTGGAGAGAACGAGCAAAAAATCCCAAGAAATAGATTCCCTTCCTGAACTTCCCAAAGCACCAAAATTAGCAGGTGGTCCGAAGGTATCTGAGCTCAGAGCAACAGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATATGACAAACGATTTGTTGCCTTCCATTATCCGGTATCAGATGAAGATGCACCTAACTATCGGTCAGTAATTCAGAACCCGATGGACATGGCTACCATACTGCAGCATGTTGATAATGGCCACTATATCACATGTTCGGCATTCTTACAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCAGTGCATGGAATGCTCTCCCAGATGGATCCAGCGCTGGTTGCTTATTGTGACAAGATTGCTGCCCAAGGTGGCCCAGTTAATTTGCCTGATGAATTCAGGGGTTCCACATTCCCATCCACTCCTGTTGTTCAGCTGGGAACCACTACTAGAATGAGTGCTCGACTTCGTAATGTGCAACCTGAGGTTAATATGGATCAAAGCTATGAGGCATTGAAGCGGACAAAAAGGAGCACTGATGGTACACATGCAGATGAGAAGTCTCGACAAGATCCTCTGCCGCCAAAGACTTTACCAGAACAGCAAGCCAGTGAAGTTGCTTGTGAAGGGCCTGAACCCGCGTCAGTTGATGAAAATGTACATGGAGCAAGTACATGTGGAGAAGGGGATGACAATAGCCTAGATGTCATAATGTCTGATGGTGAGTTTTCAAGCCAAGTGGAGTCTTTGAAGCAGCTTTTTGTGAAGCGTAGTGAAAATTACAGCATTCCACAGCTTGAAAGGATTTACACGAGAATCATGAAGGGCGTTTTTGAAGCCGAAGGCAAAGGAACGGAAAATTTGAAGACTTGGGTGTTGAGGTTTTTGTTTACATTTGTAGAAGATGATGTAAATTTCTAA 3615 0.4437 MYPKRSNQGDGPVSRPVRTSDRIKTRPNIYGRPYLYYSSKHTRKSKNKTRTAASQIAKMLRPRDRLAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDQSVSQDEVRSRKHKKVVETKPNPRREGLRPRRSKVVVREPLNSESDDERDFSEEKVGQDETENGNDLDENDADDGQNEIEGDAEGEDEGEDEDEDEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKAQPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDMHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKELKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVMVEKYHFIDAMSTITPAAHRGAIVHARPLSLVVQPCLQRHLQEAMKIISDIFPQVAVASELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFNVWWETAHEQLRAVILTLLEELPSDIPILLLGTSSVPYEEVDEVPPSLFPYRSVYNMNMPSAEDRTSFFNCLIDVALSVSLERTSKKSQEIDSLPELPKAPKLAGGPKVSELRATVEAEQHALRRLRMCLRDVCNRILYDKRFVAFHYPVSDEDAPNYRSVIQNPMDMATILQHVDNGHYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVNLPDEFRGSTFPSTPVVQLGTTTRMSARLRNVQPEVNMDQSYEALKRTKRSTDGTHADEKSRQDPLPPKTLPEQQASEVACEGPEPASVDENVHGASTCGEGDDNSLDVIMSDGEFSSQVESLKQLFVKRSENYSIPQLERIYTRIMKGVFEAEGKGTENLKTWVLRFLFTFVEDDVNF 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral70g00029 1204 MobiDBLite consensus disorder prediction 1 241 - -
Pral70g00029 1204 Pfam Bromodomain 918 983 IPR001487 GO:0005515
Pral70g00029 1204 ProSitePatterns AAA-protein family signature. 527 545 IPR003960 GO:0005524|GO:0016887
Pral70g00029 1204 SMART bromo_6 902 1009 IPR001487 GO:0005515
Pral70g00029 1204 Pfam AAA+ lid domain 585 621 IPR041569 -
Pral70g00029 1204 MobiDBLite consensus disorder prediction 1072 1113 - -
Pral70g00029 1204 FunFam ATPase family, AAA domain-containing 2 380 563 - -
Pral70g00029 1204 Gene3D - 894 1022 IPR036427 GO:0005515
Pral70g00029 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 645 IPR027417 -
Pral70g00029 1204 Gene3D - 679 853 IPR027417 -
Pral70g00029 1204 MobiDBLite consensus disorder prediction 183 229 - -
Pral70g00029 1204 MobiDBLite consensus disorder prediction 122 182 - -
Pral70g00029 1204 FunFam ATPase family AAA domain-containing protein 2B 558 643 - -
Pral70g00029 1204 Gene3D - 558 643 - -
Pral70g00029 1204 ProSiteProfiles Bromodomain profile. 925 987 IPR001487 GO:0005515
Pral70g00029 1204 SMART AAA_5 418 559 IPR003593 GO:0016887
Pral70g00029 1204 Pfam ATPase family associated with various cellular activities (AAA) 422 557 IPR003959 GO:0005524|GO:0016887
Pral70g00029 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 919 IPR027417 -
Pral70g00029 1204 SUPERFAMILY Bromodomain 900 1014 IPR036427 GO:0005515
Pral70g00029 1204 MobiDBLite consensus disorder prediction 1072 1091 - -
Pral70g00029 1204 Gene3D - 380 650 IPR027417 -
Pral70g00029 1204 FunFam ATPase family AAA domain-containing protein 894 1022 - -
Pral70g00029 1204 CDD Bromo_AAA 902 1012 - -
Pral70g00029 1204 PRINTS Bromodomain signature 968 987 IPR001487 GO:0005515
Pral70g00029 1204 PRINTS Bromodomain signature 934 950 IPR001487 GO:0005515
Pral70g00029 1204 PRINTS Bromodomain signature 950 968 IPR001487 GO:0005515
Pral70g00029 1204 PANTHER AAA DOMAIN-CONTAINING 41 1019 IPR045199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral70g00029 Pral-Chr70 490565 501829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral70g00029 368 622 Calmodulin-binding Proteins AT3G56690 36.680 3.40e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral70g00029 K22531 - gmx:100787765 1909.03