Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral70g00027 ATGAGACCAGTGCGCACTAGTGATAGGATCAAGACAAGGCCAAACATCTATGGTCGACCGTACTTGTATTACAGTTCAAAGCACACGAGGAAAAGCAAGAACAAGACAAGGACAGCTGCTTCACAAATTGCCAAGATGTTGCGGCCAAGGGATCGTCTAGCACAAGATTCAAATGCTTCTAATTCTGCAGCGACCAATCTTCGACGCTCAACGAGGAAGAGAAGGATTTCTGTTAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCAACATATCAACAACCTAGAAAGCAGATTGACCAAAGTGTGAGTCAGGATGAAGTGAGGTCTCGCAAGCACAAAAAAGTTGTGGAAACTAAACCAAACCCTCGGCGTGAAGGTCTGCGGCCTCGTCGTTCAAAGGTGGTTGTAAGAGAACCCTTGAATTCAGAATCTGATGATGAGCGAGATTTTTCAGAAGAGAAGGTTGGACAGGATGAAACAGAAAATGGGAATGATTTGGATGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGTGAGGATGAGGATGAGGATGAGGATGAGGGAGATGAAGATGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGACCTTCGAAATCGTGCAGATGTTCGCAGGTTCTCAATGGAAGAAGGGAAGGCCCAACCAAGGTCACCCCGAAGGGTGTTACATCAAGGTATGGGCACTAAGGTTGGCAGGGATGTCAGGAAGGGCGGATCAAGAGTTCACAAGCGTTATCGTTTAGCAAGACCTGAAGATTCTGATGATTCTATTCTTGTGGATGAGCTGGATCAAGGCCCTGCTATTCCATGGGGTAGAGGTGGCAGCCGGTCTGGCCCACCTTGGCTTTTTGGTGGACTAGACATGCATGGAACAACAGCATGGGGATTGAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTTTGGCTACATTGACGTCTGGGATTCAATCTGCTGGACCAAGCTCTAAAGGAGGCGCAGACATTCAACCCTTACAGGTTGATGATAGTGTTAGTTTTGATGACATAGGTGGGCTCTCTGAATATATTGATGCTCTAAAGGAAATGGTTTTCTTTCCTTTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACTCCACCTAGAGGGGTGTTGTTGTGTGGGCCCCCTGGCACAGGTAAAACATTAATTGCTAGAGCTTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTACTGAGCAAATGGGTTGGTGAGGCTGAAAGACAATTAAAATTACTCTTTGAGGAAGCACAAAAGAATCAACCTTCTATTATTTTCTTTGATGAAATAGATGGACTTGCTCCTGTGAGATCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCCACATTGCTTGCTTTGATGGATGGTCTTGACTCTCGTGGACAAGTTGTTTTAATAGGAGCAACCAATAGGATTGATGCTATTGATGGGGCCTTGCGTCGGCCCGGAAGATTTGATAGGGAATTCAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTGGACATTCATACTCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAGAGGGAGCTTGCAGCTAGTTGTGTAGGATATTGTGGTGCTGATCTTAAGGCTCTTTGTACTGAAGCTGCCATTCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTTGATTCAGTCATGGTAGAAAAGTATCACTTTATTGACGCAATGTCGACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTACATGCTAGGCCTTTGTCTCTGGTTGTTCAACCATGCCTACAAAGACATCTACAGGAAGCCATGAAAATTATATCTGATATTTTTCCTCAAGTTGCTGTTGCATCAGAATTGTCCAAACTCTCTATGCTTTCCTATGGTTCTGCAATTCCACTTGTCTATCGGCCCAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGGCTGGACCATCTTGGGCCTGCAGTTTTGCATGAACTGGAAAAATTTCCTGTTCATTCGTTAGGACTTCCATCTCTCCTATCGGATCCTAGTGCTAAGACGCCAGAGGAGGCTCTAGTTCATATATTTGGTGAAGCTAGAAGAACAACCCCATCTATTCTCTATTTACCACAGTTCAATGTTTGGTGGGAAACTGCACACGAACAGCTCAGGGCTGTTATCCTGACTTTGCTAGAAGAACTGCCTTCCGACATCCCTATTTTATTACTTGGAACATCATCAGTGCCGTATGAAGAAGTTGATGAAGTGCCTCCTTCATTGTTTCCTTACCGTTCAGTCTATAACATGAACATGCCATCTGCTGAAGACAGAACATCATTTTTCAATTGTTTGATCGATGTTGCTTTATCAGTCTCATTGGAGAGAACGAGCAAAAAATCCCAAGAAATAGATTCCCTTCCTGAACTTCCCAAAGCACCAAAATTAGCAGGTGGTCCGAAGGTATCTGAGCTCAGAGCAACAGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATATGACAAACGATTTGTTGCCTTCCATTATCCGGTATCAGATGAAGATGCACCTAACTATCGGTCAGTAATTCAGAACCCGATGGACATGGCTACCATACTGCAGCATGTTGATAATGGCCACTATATCACATGTTCGGCATTCTTACAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCAGTGCATGGAATGCTCTCCCAGATGGATCCAGCGCTGGTTGCTTATTGTGACAAGATTGCTGCCCAAGGTGGCCCAGTTAATTTGCCTGATGAATTCAGGGGTTCCACATTCCCATCCACTCCTGTTGTTCAGCTGGGAACCACTACTAGAATGAGTGCTCGACTTCGTAATGTGCAACCTGAGGTTAATATGGATCAAAGCTATGAGGCATTGAAGCGGACAAAAAGGAGCACTGATGGTACACATGCAGATGAGAAGTCTCGACAAGATCCTCTGCCGCCAAAGACTTTACCAGAACAGCAAGCCAGTGAAGTTGCTTGTGAAGGGCCTGAACCCGCGTCAGTTGATGAAAATGTACATGGAGCAAGTACATGTGGAGAAGGGGATGACAATAGCCTAGATGTCATAATGTCTGATGGTGAGTTTTCAAGCCAAGTGGAGTCTTTGAAGCAGCTTTTTGTGAAGCGTAGTGAAAATTACAGCATTCCACAGCTTGAAAGGATTTACACGAGAATCATGAAGGGCGTTTTTGAAGCCGAAGGCAAAGGAACGGAAAATTTGAAGACTTGGGTGTTGAGGTTTTTGTTTACATTTGTAGAAGATGATGTAAATTTCTAA 3576 0.443 MRPVRTSDRIKTRPNIYGRPYLYYSSKHTRKSKNKTRTAASQIAKMLRPRDRLAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDQSVSQDEVRSRKHKKVVETKPNPRREGLRPRRSKVVVREPLNSESDDERDFSEEKVGQDETENGNDLDENDADDGQNEIEGDAEGEDEGEDEDEDEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKAQPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDMHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKELKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVMVEKYHFIDAMSTITPAAHRGAIVHARPLSLVVQPCLQRHLQEAMKIISDIFPQVAVASELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFNVWWETAHEQLRAVILTLLEELPSDIPILLLGTSSVPYEEVDEVPPSLFPYRSVYNMNMPSAEDRTSFFNCLIDVALSVSLERTSKKSQEIDSLPELPKAPKLAGGPKVSELRATVEAEQHALRRLRMCLRDVCNRILYDKRFVAFHYPVSDEDAPNYRSVIQNPMDMATILQHVDNGHYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVNLPDEFRGSTFPSTPVVQLGTTTRMSARLRNVQPEVNMDQSYEALKRTKRSTDGTHADEKSRQDPLPPKTLPEQQASEVACEGPEPASVDENVHGASTCGEGDDNSLDVIMSDGEFSSQVESLKQLFVKRSENYSIPQLERIYTRIMKGVFEAEGKGTENLKTWVLRFLFTFVEDDVNF 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral70g00027 1191 FunFam ATPase family AAA domain-containing protein 881 1009 - -
Pral70g00027 1191 FunFam ATPase family AAA domain-containing protein 2B 545 630 - -
Pral70g00027 1191 MobiDBLite consensus disorder prediction 170 216 - -
Pral70g00027 1191 MobiDBLite consensus disorder prediction 1059 1100 - -
Pral70g00027 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 906 IPR027417 -
Pral70g00027 1191 MobiDBLite consensus disorder prediction 109 169 - -
Pral70g00027 1191 Pfam ATPase family associated with various cellular activities (AAA) 409 544 IPR003959 GO:0005524|GO:0016887
Pral70g00027 1191 ProSitePatterns AAA-protein family signature. 514 532 IPR003960 GO:0005524|GO:0016887
Pral70g00027 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 632 IPR027417 -
Pral70g00027 1191 Gene3D - 367 637 IPR027417 -
Pral70g00027 1191 FunFam ATPase family, AAA domain-containing 2 367 550 - -
Pral70g00027 1191 Pfam AAA+ lid domain 572 608 IPR041569 -
Pral70g00027 1191 PRINTS Bromodomain signature 955 974 IPR001487 GO:0005515
Pral70g00027 1191 PRINTS Bromodomain signature 921 937 IPR001487 GO:0005515
Pral70g00027 1191 PRINTS Bromodomain signature 937 955 IPR001487 GO:0005515
Pral70g00027 1191 SUPERFAMILY Bromodomain 887 1001 IPR036427 GO:0005515
Pral70g00027 1191 SMART bromo_6 889 996 IPR001487 GO:0005515
Pral70g00027 1191 PANTHER AAA DOMAIN-CONTAINING 28 1006 IPR045199 -
Pral70g00027 1191 Gene3D - 881 1009 IPR036427 GO:0005515
Pral70g00027 1191 MobiDBLite consensus disorder prediction 1059 1078 - -
Pral70g00027 1191 Gene3D - 666 840 IPR027417 -
Pral70g00027 1191 Gene3D - 545 630 - -
Pral70g00027 1191 ProSiteProfiles Bromodomain profile. 912 974 IPR001487 GO:0005515
Pral70g00027 1191 SMART AAA_5 405 546 IPR003593 GO:0016887
Pral70g00027 1191 Pfam Bromodomain 905 970 IPR001487 GO:0005515
Pral70g00027 1191 CDD Bromo_AAA 889 999 - -
Pral70g00027 1191 MobiDBLite consensus disorder prediction 24 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral70g00027 Pral-Chr70 490565 501829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral70g00027 355 609 Calmodulin-binding Proteins AT3G56690 36.680 3.43e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral70g00027 K22531 - gmx:100787765 1891.32