Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral70g00022 ATGCATTATCAGCCCCATACTTTCCTCTCTTCTGATGAAGTACTCTTATCTCTGCCTCAACCATCACTTGCCCATTCTCTGTTTCCCAACTCTTCTGCTGACGCTGGCTGCACAACCGATCCTCTGGACTCGGTTTCAAATGTTCAGAAATTGATCGTCCATCAAGTTCGCCCCATAAGATATGGACCTGCTGTCGAAACTTCTCAAGGGACTTTCGACATACCCACAGTTTTTCACAGTTCGTGGTGGGACAGTTGGGTGCGTCAAATTAACCAAACCAAAACCAACAACCCGTTGCGATGTGAGGTTTGCAAAATTGATCTTAATAGCAAGAGTGTGTTTGAAGACCACATATCAGGGAAGACACACAAGAAGAGCATACAATTGCACAATAATCCGAACAACACTATATCATCTGGAACTGCTAATGTAACTTTTCAAATCCAAGAGAGTGGTGTCCAAGGACAAGAGCTGCTTGTTGATGCAGACAAGGATTTAAAGTCTAAGAAACAGAAGTTTTTGATCATGGGGGAAGCAGAGCTCGCTGATCAGGCTGTCAAAACTTCTCAAGGGACTTCCGACATGCTCACAATTTTTCATAATCTATGGAGGGACAATTGGGTGCGTCAAATTAACCAAACCAAAATCAACAAGCGAATGCGATGTGAGGTTTGCAAAATTGATCTTAATAGTAAGAGTGTGTTTGAAGACCACATATCAGGGAAGAAACACAAGAAGAACATGCAATTGCACACTAATCCAAGTAACACAGTGTCATCTGCTATCGCTAATATGAATTTTCAAATCCAAAATAGTGGTGTTCAAGGACAAGAGCCACTTTTTGATGCGGACAAGGATTTAAAGTCTAAGAAACGGAAGCTTTTGATCATGGGAGAAGCAGAGCTCGCTGATCAGGCGATGGATCCAACAAATGAGCCATTGGAAAAGTTGGACACTAGTAAACAAGAGTTGATCAATTCACATAAACCAGAAATTGCATTCATGTTAGAAGCTCCAGAAAAGGACGTTGAAACAAAGAAACAGAAGTGTGAACTTGAATTCCCTTCTAGATGTGAAATTTGCTCGATCGATTGTAATAGTAAGAAAGTATATATCAGTCATTTATCAGGGAAGAAACACCAGAGGAACCTGGAGAAAGTGTCACAATCTGAAGATAACAGAGCCATTGCTAGTGTAGCCAGTGCTGCTGCAGCCACTATGACAGAAATTGATGTGCAACAAGCAACAAAACAAGCAATTGAGCCACAGGAAAAGCTGGAGACTAGTCCACAAGAAGGTATGGATACACATGAATCAGGAAACATAGTCATTTTTGAGGCTCCAGAAAAGGATACTGAGACAGAGAGACTTAGAATTGAACCTTTTGGTGGGGCTGCAATTACTTTTTCCATAGTGTGCGAACTATGCAACGCAGCATGCAACAGCGAGACGGTCTTTAATTCGCACCTCCATGGGAAGAAACATGCTGCTATGGCGAAGAAGCTGACAATGTCAAAGTAG 1521 0.4188 MHYQPHTFLSSDEVLLSLPQPSLAHSLFPNSSADAGCTTDPLDSVSNVQKLIVHQVRPIRYGPAVETSQGTFDIPTVFHSSWWDSWVRQINQTKTNNPLRCEVCKIDLNSKSVFEDHISGKTHKKSIQLHNNPNNTISSGTANVTFQIQESGVQGQELLVDADKDLKSKKQKFLIMGEAELADQAVKTSQGTSDMLTIFHNLWRDNWVRQINQTKINKRMRCEVCKIDLNSKSVFEDHISGKKHKKNMQLHTNPSNTVSSAIANMNFQIQNSGVQGQEPLFDADKDLKSKKRKLLIMGEAELADQAMDPTNEPLEKLDTSKQELINSHKPEIAFMLEAPEKDVETKKQKCELEFPSRCEICSIDCNSKKVYISHLSGKKHQRNLEKVSQSEDNRAIASVASAAAATMTEIDVQQATKQAIEPQEKLETSPQEGMDTHESGNIVIFEAPEKDTETERLRIEPFGGAAITFSIVCELCNAACNSETVFNSHLHGKKHAAMAKKLTMSK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral70g00022 506 SUPERFAMILY beta-beta-alpha zinc fingers 471 503 IPR036236 -
Pral70g00022 506 SUPERFAMILY beta-beta-alpha zinc fingers 215 251 IPR036236 -
Pral70g00022 506 SMART c2h2final6 99 123 IPR013087 -
Pral70g00022 506 SMART c2h2final6 220 244 IPR013087 -
Pral70g00022 506 SMART c2h2final6 471 495 IPR013087 -
Pral70g00022 506 SMART c2h2final6 356 380 IPR013087 -
Pral70g00022 506 SUPERFAMILY beta-beta-alpha zinc fingers 93 130 IPR036236 -
Pral70g00022 506 Gene3D Classic Zinc Finger 464 502 - -
Pral70g00022 506 Gene3D Classic Zinc Finger 206 252 - -
Pral70g00022 506 Gene3D Classic Zinc Finger 86 131 - -
Pral70g00022 506 Gene3D Classic Zinc Finger 336 389 - -
Pral70g00022 506 PANTHER OS06G0651300 PROTEIN-RELATED 315 502 - -
Pral70g00022 506 SUPERFAMILY beta-beta-alpha zinc fingers 355 387 IPR036236 -
Pral70g00022 506 SMART ZnF_U1_5 96 130 IPR003604 GO:0003676|GO:0008270
Pral70g00022 506 SMART ZnF_U1_5 468 502 IPR003604 GO:0003676|GO:0008270
Pral70g00022 506 SMART ZnF_U1_5 358 387 IPR003604 GO:0003676|GO:0008270
Pral70g00022 506 SMART ZnF_U1_5 217 251 IPR003604 GO:0003676|GO:0008270
Pral70g00022 506 Pfam Zinc-finger of C2H2 type 222 244 - -
Pral70g00022 506 Pfam Zinc-finger of C2H2 type 357 380 - -
Pral70g00022 506 Pfam Zinc-finger of C2H2 type 472 495 - -
Pral70g00022 506 Pfam Zinc-finger of C2H2 type 100 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral70g00022 Pral-Chr70 316168 321610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral70g00022 353 498 C2H2 Transcription Factor Family AT5G61190 28.743 4.59e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral70g00022 - - pcin:129315651 406.371