LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral70g00018	ATGGCGATGATACTTCCGACGTTGGTTTTTCTGGGATTCTTGTCGCTTCAGATTCATTTGATCTTCTCTTTCACTGATCCTCAAGATGTTGCAGTAGTAAGATCTTTAAAGGATATGTGGCAAAACACACCACCCAGTTGGGATAAATCAGATGATCCCTGTGGAGCCCCTTGGGAAGGAGTCACCTGCAACAGATCCAGAATCACTTCACTGGGATTGTCAACTATGGGCCTCGAAGGCAAACTGAGTGGAGACATTGGAGGTCTCACTGAGTTAAGATCCTTGGACTTGTCGTTTAACAGAGGTTTGAAGGGTCCTCTGTCTCCACAATTAGGAGACCTCAAAAATCTAAATATATTGATTTTGGCTGGTTGCAGCTTCAGCGGCAAAATTCCAAATGAATTGGGAAATCTCTCCGAACTTTCATTCTTGGCATTAAATTCAAACAACTTGTCTGGAGATATACCAACTTCATTGGGTAATCTTTCCAAATTATATTGGTTGGACTTGGCAGACAATCAATTAACAGGGCCAATTCCCGTGTCCACTCCCACATCTCCTGGATTAGACATGCTTTTAAAGGCCAAGCACTTCCATTTCAATAAGAACCAGCTATCAGGTCCCATTCCACCAAACCTTTTCCACTCTGAGATGGTACTCATTCATGTGTTATTTGATGGGAATCGTTTAACAGGCACAATTCCATCAACATTAGAATTAGTTCAAACACTTGAAGTTCTAAATTTCTTTACTGGAGAAGTCCCGTCAAATCTCAACAACCTAACCAACCTCAATGAATTGAATTTGGCACATAATAAATTGACAGGTTCTTTACCAGATTTGTCTCAGATGGATACTCTCAATTACGTGGATCTGAGCAATAATTCTTTTGATCCTTCTCAACCCCCATTATGGTTCCAAACTTTACCATCACTTACCACTTTAATTATGGAGTTTGGATCACTCGACGGTCCTCTGCCATCAAAACTCTTCAGCAGTCCCCAAATACAACAAGTGAAATTAAAGCACAATACATTGAACAACACTTTGGACATGGGGGACAGCATTAGCCCTCAATTACAGCTTGTAGATTTGCAAGACAACCAGATTACTTCAGTAACACTCAGTTCTGGATACAAAAATACGTTGATTTTGATTGGAAATCCAGTGTGCCTTACAGCTCTCTCAAATACCAATTACTGTCAACTACAACAACGACCCAAAAAGCCTTACTCTACCAGCTTGGCTAATTGTGGAAGCAAATCATGTCCTACTGATCAGAAGTTAAGCCCGCAAAGTTGTGAATGTGCCTATCCATATGAAGGAATTTTATATTTCAGAGGACCCTTGTTTAGAGAATTATCAAATGCAAATACATTTCATTCTCTTGAGATGAGTTTGTGGGTGAAGTTAGGCCTCACTCCTGGTTCAGTATCATTACAAAACCCATTTTTCAATAGTGATGATTATCTTCAAGTGCAATTAGCACTCTTCCCACCAACAGGAACATACTTCAATAGGTCAGATATTCAGAGAATTGGATTTCGATTAAGTAATCAAACTTACAAGCCACCACCAGAGCTTGGACCATATTACTTCATTGCATTTCCTTATGCTTTCCCAGTTCAAACTGCTTCAGAAACTCGTGGAGCGGCTTCTCTAAGCAAGCCTGTTGTCATTGGGATAGCAATTGGTTGCTCATTTCTGGTATTGAGCCTCGTAGGGCTAGGGATATATGCCATTATACAAAAGAAGCGTGCAGAGCAAGCCATTGTGCTAAGCAGGCCTTTTGCGTCATGGACACCTAGTGGGAAGGATAGTGGAGGAGCTCCACAACTAAAAGGAGCGAGATGGTTTTCTTATGATGAACTCAAAAAGTGCACATCAAATTTCTCCCATAACAATGAGTTAGGATTTGGAGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGACAAATGGTTGCAATAAAGCGAGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCCCTTGTAGGCTTCTGCTTTGAACAGGGAGAGCAAATGTTAGTTTATGAATATATGCCTAATGGAACACTCAGGGATTGTTTATCAGGTAGATGTGGAATTTATCTAGACTGGAAGAGGAGGTTAAGAGTTGCTCTCGGATCAGCAAGGGGACTTGCTTATTTACATGAACTTGCTAACCCTCCAATAATTCATAGAGATGTCAAGTCCTCTAATATCTTGCTAGATGAGAATTTGACAGCAAAAGTTGCAGATTTTGGCTTGTCAAAGTTAGCATCAGATAGTGGAAAAGGCCATGTTTCTACTCAGGTTAAAGGCACATTGGGGTATCTTGATCCTGAATATTACATGACACAGCAATTGACCGAAAAGAGTGATGTGTATAGTTTTGGGGTTGTGATGCTCGAACTTATAACTGCGAGACAACCTATCGAGAAAGGAAAGTACGTTGTGCGTGAAGTGAGGTCATTGATAAATAAGAATGAACAAGAGTATTGTGGTTTAAGGGACATGATGGATCCAGTGGTTATAGAAACTTGTAATCTTGGGGGGTTTCGTACGTTCTTGGATCTCACAATGCAATGTGTTGAGGAATCAGCTTCTGATCGTCCAACAATGAGTGAAGTTGTGAAAGCTCTTGAAATCATTCTACAAAATGATGGCTTGAACACAAACTCAACTTCTGCTTCCTCTTCTGCAACAGACTTTGCACTTTCTAAGACTTCTCTCACACATCCATACATGGATACTTTCAGCAGAAAGGACATTAATGAGACCAATAGTGCATTTGACTATAGTGGCGGCTATACACTTCCTGCAAAAATCGAGCCGAAATAG	2901	0.4071	MAMILPTLVFLGFLSLQIHLIFSFTDPQDVAVVRSLKDMWQNTPPSWDKSDDPCGAPWEGVTCNRSRITSLGLSTMGLEGKLSGDIGGLTELRSLDLSFNRGLKGPLSPQLGDLKNLNILILAGCSFSGKIPNELGNLSELSFLALNSNNLSGDIPTSLGNLSKLYWLDLADNQLTGPIPVSTPTSPGLDMLLKAKHFHFNKNQLSGPIPPNLFHSEMVLIHVLFDGNRLTGTIPSTLELVQTLEVLNFFTGEVPSNLNNLTNLNELNLAHNKLTGSLPDLSQMDTLNYVDLSNNSFDPSQPPLWFQTLPSLTTLIMEFGSLDGPLPSKLFSSPQIQQVKLKHNTLNNTLDMGDSISPQLQLVDLQDNQITSVTLSSGYKNTLILIGNPVCLTALSNTNYCQLQQRPKKPYSTSLANCGSKSCPTDQKLSPQSCECAYPYEGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRSDIQRIGFRLSNQTYKPPPELGPYYFIAFPYAFPVQTASETRGAASLSKPVVIGIAIGCSFLVLSLVGLGIYAIIQKKRAEQAIVLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSHNNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRVALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLASDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYVVREVRSLINKNEQEYCGLRDMMDPVVIETCNLGGFRTFLDLTMQCVEESASDRPTMSEVVKALEIILQNDGLNTNSTSASSSATDFALSKTSLTHPYMDTFSRKDINETNSAFDYSGGYTLPAKIEPK	966

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral70g00018	966	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	707	917	-	-
	Pral70g00018	966	Gene3D	Phosphorylase Kinase; domain 1	605	706	-	-
	Pral70g00018	966	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	751	763	IPR008271	GO:0004672\|GO:0006468
	Pral70g00018	966	CDD	STKc_IRAK	637	904	-	-
	Pral70g00018	966	Gene3D	Transferase(Phosphotransferase) domain 1	707	926	-	-
	Pral70g00018	966	FunFam	Leucine-rich repeat family protein	28	184	-	-
	Pral70g00018	966	ProSiteProfiles	Protein kinase domain profile.	631	905	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral70g00018	966	SUPERFAMILY	Protein kinase-like (PK-like)	616	927	IPR011009	-
	Pral70g00018	966	SUPERFAMILY	L domain-like	46	401	-	-
	Pral70g00018	966	FunFam	Leucine-rich repeat protein kinase family protein	185	280	-	-
	Pral70g00018	966	SMART	serkin_6	631	904	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral70g00018	966	Pfam	Protein tyrosine and serine/threonine kinase	634	901	IPR001245	GO:0004672\|GO:0006468
	Pral70g00018	966	ProSitePatterns	Protein kinases ATP-binding region signature.	637	659	IPR017441	GO:0005524
	Pral70g00018	966	PANTHER	RECEPTOR-LIKE PROTEIN 55	34	905	-	-
	Pral70g00018	966	Gene3D	Ribonuclease Inhibitor	30	248	IPR032675	-
	Pral70g00018	966	ProSiteProfiles	Leucine-rich repeat profile.	263	285	IPR001611	GO:0005515
	Pral70g00018	966	Gene3D	Ribonuclease Inhibitor	249	423	IPR032675	-
	Pral70g00018	966	Pfam	Leucine rich repeat N-terminal domain	28	64	IPR013210	-
	Pral70g00018	966	FunFam	Leucine-rich repeat protein kinase family protein	599	706	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral70g00018	Pral-Chr70	304810	312214	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral70g00018	20	966	Receptor kinase-like Gene Family	AT1G79620	71.764	0.0	1416

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Pral70g00018		PK_Tyr_Ser-Thr	6.8e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral70g00018	-		-	gmx:100792249	1549.64