Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral70g00017 ATGGCGATGATACTTCCGACGTTGGTTTTTCTGGGATTCTTGTCGCTTCAGATTCATTTGATCTTCTCTTTCACTGATCCTCAAGATGTTGCAGTAGTAAGATCTTTAAAGGATATGTGGCAAAACACACCACCCAGTTGGGATAAATCAGATGATCCCTGTGGAGCCCCTTGGGAAGGAGTCACCTGCAACAGATCCAGAATCACTTCACTGGGATTGTCAACTATGGGCCTCGAAGGCAAACTGAGTGGAGACATTGGAGGTCTCACTGAGTTAAGATCCTTGGACTTGTCGTTTAACAGAGGTTTGAAGGGTCCTCTGTCTCCACAATTAGGAGACCTCAAAAATCTAAATATATTGATTTTGGCTGGTTGCAGCTTCAGCGGCAAAATTCCAAATGAATTGGGAAATCTCTCCGAACTTTCATTCTTGGCATTAAATTCAAACAACTTGTCTGGAGATATACCAACTTCATTGGGTAATCTTTCCAAATTATATTGGTTGGACTTGGCAGACAATCAATTAACAGGGCCAATTCCCGTGTCCACTCCCACATCTCCTGGATTAGACATGCTTTTAAAGGCCAAGCACTTCCATTTCAATAAGAACCAGCTATCAGGTCCCATTCCACCAAACCTTTTCCACTCTGAGATGGTACTCATTCATGTGTTATTTGATGGGAATCGTTTAACAGGCACAATTCCATCAACATTAGAATTAGTTCAAACACTTGAAGTTCTGAATTTGGCACATAATAAATTGACAGGTTCTTTACCAGATTTGTCTCAGATGGATACTCTCAATTACGTGGATCTGAGCAATAATTCTTTTGATCCTTCTCAACCCCCATTATGGTTCCAAACTTTACCATCACTTACCACTTTAATTATGGAGTTTGGATCACTCGACGGTCCTCTGCCATCAAAACTCTTCAGCAGTCCCCAAATACAACAAGTGAAATTAAAGCACAATACATTGAACAACACTTTGGACATGGGGGACAGCATTAGCCCTCAATTACAGCTTGTAGATTTGCAAGACAACCAGATTACTTCAGTAACACTCAGTTCTGGATACAAAAATACGTTGATTTTGATTGGAAATCCAGTGTGCCTTACAGCTCTCTCAAATACCAATTACTGTCAACTACAACAACGACCCAAAAAGCCTTACTCTACCAGCTTGGCTAATTGTGGAAGCAAATCATGTCCTACTGATCAGAAGTTAAGCCCGCAAAGTTGTGAATGTGCCTATCCATATGAAGGAATTTTATATTTCAGAGGACCCTTGTTTAGAGAATTATCAAATGCAAATACATTTCATTCTCTTGAGATGAGTTTGTGGGTGAAGTTAGGCCTCACTCCTGGTTCAGTATCATTACAAAACCCATTTTTCAATAGTGATGATTATCTTCAAGTGCAATTAGCACTCTTCCCACCAACAGGAACATACTTCAATAGGTCAGATATTCAGAGAATTGGATTTCGATTAAGTAATCAAACTTACAAGCCACCACCAGAGCTTGGACCATATTACTTCATTGCATTTCCTTATGCTTTCCCAGTTCAAACTGCTTCAGAAACTCGTGGAGCGGCTTCTCTAAGCAAGCCTGTTGTCATTGGGATAGCAATTGGTTGCTCATTTCTGGTATTGAGCCTCGTAGGGCTAGGGATATATGCCATTATACAAAAGAAGCGTGCAGAGCAAGCCATTGTGCTAAGCAGGCCTTTTGCGTCATGGACACCTAGTGGGAAGGATAGTGGAGGAGCTCCACAACTAAAAGGAGCGAGATGGTTTTCTTATGATGAACTCAAAAAGTGCACATCAAATTTCTCCCATAACAATGAGTTAGGATTTGGAGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGACAAATGGTTGCAATAAAGCGAGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCCCTTGTAGGCTTCTGCTTTGAACAGGGAGAGCAAATGTTAGTTTATGAATATATGCCTAATGGAACACTCAGGGATTGTTTATCAGGTAGATGTGGAATTTATCTAGACTGGAAGAGGAGGTTAAGAGTTGCTCTCGGATCAGCAAGGGGACTTGCTTATTTACATGAACTTGCTAACCCTCCAATAATTCATAGAGATGTCAAGTCCTCTAATATCTTGCTAGATGAGAATTTGACAGCAAAAGTTGCAGATTTTGGCTTGTCAAAGTTAGCATCAGATAGTGGAAAAGGCCATGTTTCTACTCAGGTTAAAGGCACATTGGGGTATCTTGATCCTGAATATTACATGACACAGCAATTGACCGAAAAGAGTGATGTGTATAGTTTTGGGGTTGTGATGCTCGAACTTATAACTGCGAGACAACCTATCGAGAAAGGAAAGTACGTTGTGCGTGAAGTGAGGTCATTGATAAATAAGAATGAACAAGAGTATTGTGGTTTAAGGGACATGATGGATCCAGTGGTTATAGAAACTTGTAATCTTGGGGGGTTTCGTACGTTCTTGGATCTCACAATGCAATGTGTTGAGGAATCAGCTTCTGATCGTCCAACAATGAGTGAAGTTGTGAAAGCTCTTGAAATCATTCTACAAAATGATGGCTTGAACACAAACTCAACTTCTGCTTCCTCTTCTGCAACAGACTTTGCACTTTCTAAGACTTCTCTCACACATCCATACATGGATACTTTCAGCAGAAAGGACATTAATGAGACCAATAGTGCATTTGACTATAGTGGCGGCTATACACTTCCTGCAAAAATCGAGCCGAAATAG 2841 0.408 MAMILPTLVFLGFLSLQIHLIFSFTDPQDVAVVRSLKDMWQNTPPSWDKSDDPCGAPWEGVTCNRSRITSLGLSTMGLEGKLSGDIGGLTELRSLDLSFNRGLKGPLSPQLGDLKNLNILILAGCSFSGKIPNELGNLSELSFLALNSNNLSGDIPTSLGNLSKLYWLDLADNQLTGPIPVSTPTSPGLDMLLKAKHFHFNKNQLSGPIPPNLFHSEMVLIHVLFDGNRLTGTIPSTLELVQTLEVLNLAHNKLTGSLPDLSQMDTLNYVDLSNNSFDPSQPPLWFQTLPSLTTLIMEFGSLDGPLPSKLFSSPQIQQVKLKHNTLNNTLDMGDSISPQLQLVDLQDNQITSVTLSSGYKNTLILIGNPVCLTALSNTNYCQLQQRPKKPYSTSLANCGSKSCPTDQKLSPQSCECAYPYEGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRSDIQRIGFRLSNQTYKPPPELGPYYFIAFPYAFPVQTASETRGAASLSKPVVIGIAIGCSFLVLSLVGLGIYAIIQKKRAEQAIVLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSHNNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRVALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLASDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYVVREVRSLINKNEQEYCGLRDMMDPVVIETCNLGGFRTFLDLTMQCVEESASDRPTMSEVVKALEIILQNDGLNTNSTSASSSATDFALSKTSLTHPYMDTFSRKDINETNSAFDYSGGYTLPAKIEPK 946
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral70g00017 946 ProSiteProfiles Leucine-rich repeat profile. 243 265 IPR001611 GO:0005515
Pral70g00017 946 Gene3D Transferase(Phosphotransferase) domain 1 687 906 - -
Pral70g00017 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Pral70g00017 946 SMART serkin_6 611 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral70g00017 946 FunFam Leucine-rich repeat protein kinase family protein 579 686 - -
Pral70g00017 946 FunFam Leucine-rich repeat family protein 28 184 - -
Pral70g00017 946 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 687 897 - -
Pral70g00017 946 CDD STKc_IRAK 617 884 - -
Pral70g00017 946 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Pral70g00017 946 ProSiteProfiles Protein kinase domain profile. 611 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral70g00017 946 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pral70g00017 946 SUPERFAMILY Protein kinase-like (PK-like) 596 907 IPR011009 -
Pral70g00017 946 SUPERFAMILY L domain-like 29 329 - -
Pral70g00017 946 Gene3D Phosphorylase Kinase; domain 1 585 686 - -
Pral70g00017 946 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Pral70g00017 946 Gene3D Ribonuclease Inhibitor 185 368 IPR032675 -
Pral70g00017 946 PANTHER RECEPTOR-LIKE PROTEIN 55 34 885 - -
Pral70g00017 946 Pfam Protein tyrosine and serine/threonine kinase 614 881 IPR001245 GO:0004672|GO:0006468
Pral70g00017 946 FunFam Leucine-rich repeat protein kinase family protein 185 283 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral70g00017 Pral-Chr70 304810 312214 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral70g00017 20 946 Receptor kinase-like Gene Family AT1G79620 70.438 0.0 1384
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral70g00017 PK_Tyr_Ser-Thr 6.5e-48 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral70g00017 - - gmx:100792249 1506.5