Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral709g00008 ATGGAAATAATTCCACCAGGGTACAAGTTTAACCCAACAGACCAAGAATTGATTTGGCATTACTTGTACAAGAAGGTGAATGGCAAACCCCTCCCTTGTAATGCAATTATTGATTGTGACATTTATGGAGGTGACAGTTCTTGGAGGAAGATGTTTGATGATCGGGAAGTGGAAACTCTTTACTTCTTCACTAAACTAAGGAACTGGAGCACCCAAAAAAATGGCTGTTCTTCAAGGGTTGTGAGAGCCACAAAGTTTGGTACTTGGAGGTGTCAATCTGACATGAAAATCTACGCTGGGAAGAAACATGTTGGGTCGAAGAGGGCCTTCTCCTTCATTGAGAAGAAGAAGGAAGAAGAGCCCAAGAAAAAAGGATCTAGGAGGACAAATGGTTGGACAATGCACGAGTACAGACTTGATGGTTGTCTTGTGCATCAAAAGGAACACAATTCTTCAGATTATGGGTATGTGGTCTCCAGGATCAGCAGGCCCAGATGCATGAGGAAAGATGAAGGAGAATCAATCAGCTCTCAAATTGCGTCCGAACAGGATGCTCCATTTCCTGAAGAGCTAAACCAAGACAATAATAAAGGAAAATTAATCAGCTCTCAAATTGAATGTGAACAGGATGCTCCATTTCCTGAAGAGCTAAATCAAGACAGCAACAAAGTTGAAGGTACTGAGGTGCTTCCTGGTTATTCTATTGAGGTAGATATAAATGATGAATGGTTATCATGTTTTCTTGAAGACACGGATCTAAATAATTTGTCTTTCCTCTGGCAATAA 786 0.4084 MEIIPPGYKFNPTDQELIWHYLYKKVNGKPLPCNAIIDCDIYGGDSSWRKMFDDREVETLYFFTKLRNWSTQKNGCSSRVVRATKFGTWRCQSDMKIYAGKKHVGSKRAFSFIEKKKEEEPKKKGSRRTNGWTMHEYRLDGCLVHQKEHNSSDYGYVVSRISRPRCMRKDEGESISSQIASEQDAPFPEELNQDNNKGKLISSQIECEQDAPFPEELNQDSNKVEGTEVLPGYSIEVDINDEWLSCFLEDTDLNNLSFLWQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral709g00008 261 MobiDBLite consensus disorder prediction 170 195 - -
Pral709g00008 261 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral709g00008 261 PANTHER NAC TRANSCRIPTION FACTOR 56 4 193 - -
Pral709g00008 261 Pfam No apical meristem (NAM) protein 5 139 IPR003441 GO:0003677|GO:0006355
Pral709g00008 261 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Pral709g00008 261 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral709g00008 Pral-Chr709 25438 26223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral709g00008 4 161 NAC Transcription Factor Family AT5G07680 33.962 2.57e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral709g00008 NAM 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral709g00008 - - qlo:115974396 124.79