Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral708g00008 | ATGACCGACCCCTACTGCCCCGAAGCCTTCAATTCTCCCTTCCTTTTCTCCTCCTCCTTTAACTTTCCTTGTGCTCATTTTAACTCGTCATCTCTCGCTTTACCCTCTTCTCCTCCTCCGAGAGAAGCCCTACCTCTCCTTAACCTAAGCCCTCCAAGACATGACGAAGATGATATGCAAGTAGACATCAAGCAGAAAGAAGGAGCCACGGGGTGTGGTTCTTTGAATGATGATCCTGTGACGTTGGCTTTGCAGTTACACCTCGGCCTTCCAACCCCAAGCAGTTCATCGCCTGACTTGGCTGATTCGAACCTATGCTCCTCAGAGACAGTTTCAGACAAAGACGAAGTCACAACTGTATCTTCTGGGTATCTCTCTGATAGGATCACTCCAGGCGGTCAGTATTGGATCCCTACCCAAGCTCAGATTCTGATTGGTCCCACACAGTTCTCCTGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATACAGAAGGGGACCAGAGTCTCTAAGGGGGACACAGCCAACAGCAATGCTGAGGCTTCCATGCTATTGTTGTGCACCTGGGTGCAAGAACAACATCGAGCATCCCAGAGCTAAACCTCTAAAAGACTTCAGAACCCTTCAAACCCATTACAAGAGAAAGCACGGGATAAAGCCTTTCATGTGTAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGTGATTGGAGAACTCACGAGAAGAACTGTGGCAAACTCTGGTATTGCTCCTGTGGCTCTGACTTCAAGCATAAAAGATCTCTTAAGGATCATGTCAAGGCTTTCGGACATAGCCACACGCCTTGTGGTGTTGACTGTCTCCATCAGGATGAAGTGCCCTCTGAAATTGACCACCCAAATGACTCCTTTCATTCTCATCATAACTAA | 945 | 0.4751 | MTDPYCPEAFNSPFLFSSSFNFPCAHFNSSSLALPSSPPPREALPLLNLSPPRHDEDDMQVDIKQKEGATGCGSLNDDPVTLALQLHLGLPTPSSSSPDLADSNLCSSETVSDKDEVTTVSSGYLSDRITPGGQYWIPTQAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSEYRRGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGHSHTPCGVDCLHQDEVPSEIDHPNDSFHSHHN | 314 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral708g00008 | 314 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 150 | 177 | IPR013087 | - | |
Pral708g00008 | 314 | Gene3D | Classic Zinc Finger | 149 | 172 | - | - | |
Pral708g00008 | 314 | FunFam | Zinc finger protein WIP2 | 203 | 285 | - | - | |
Pral708g00008 | 314 | PANTHER | ZINC FINGER PROTEIN WIP2 | 18 | 298 | IPR043584 | GO:0003700|GO:0010468 | |
Pral708g00008 | 314 | SUPERFAMILY | beta-beta-alpha zinc fingers | 216 | 254 | IPR036236 | - | |
Pral708g00008 | 314 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 152 | 172 | IPR013087 | - | |
Pral708g00008 | 314 | MobiDBLite | consensus disorder prediction | 31 | 55 | - | - | |
Pral708g00008 | 314 | SUPERFAMILY | beta-beta-alpha zinc fingers | 146 | 173 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral708g00008 | Pral-Chr708 | 41982 | 44320 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral708g00008 | 14 | 296 | C2H2 Transcription Factor Family | AT1G51220 | 61.565 | 2.17e-122 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pral708g00008 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral708g00008 | - | - | qsa:O6P43_000130 | 436.802 |