Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral706g00003 ATGTGTGAAACTAACTGTCAACCATATGAAGGAGAGAAGCTGGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTTGGGAAGACTGACACAGCGTCTGTGCTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAGATCGAGGCTCTCAGCTTACCATACTTGGGCAATACTGCTTCATCAAACATCAGGCACCAACAACAACAATCTGCAGTTCAAGGAGAGAATAATTGTATATTCCCTGAAGACCCTGGTCAGCTTCTGCATGAAAACAGCTTGAAGAGGAAAGCGCCTGGCAGTAATCAGCAGGAATCAAGAGAAGAAAGGAAGAAGGACCTGAGAAGTAGAGGGTTGTGTCTGGTTCCAGTGTCGTGCACAATGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCTCCTGCACTAGGCGCAGGGTTTCGATAG 456 0.4671 MCETNCQPYEGEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTASSNIRHQQQQSAVQGENNCIFPEDPGQLLHENSLKRKAPGSNQQESREERKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral706g00003 151 Gene3D - 12 81 IPR036638 GO:0046983
Pral706g00003 151 MobiDBLite consensus disorder prediction 69 117 - -
Pral706g00003 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 59 IPR036638 GO:0046983
Pral706g00003 151 CDD bHLH_AtbHLH_like 12 55 IPR045239 -
Pral706g00003 151 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral706g00003 Pral-Chr706 36503 38643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral706g00003 12 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 78.750 3.47e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral706g00003 - - cpap:110818634 231.106