Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral706g00001 ATGTCTGTGCCACAGGAGCAGGACTATGTGGGCTTGACAGAGCTTCCTTCAATGGAAAAAGGCTCAGACAAGTTTTCTCAGAGAAGCAATAGTGGCTTGAACCTCAAGGCCACTGAGCTACGACTCGGACTGCCTGGGTCCGAGTCACCGGAGAGGGATGGTGCCGGCGCCGGAAAGAGTGCAGCGGTCTGTGGGGCCAAGAGGGGTTTCTCAGACACCATTAATGGTGGTTCTGGAAAGTGGGCTATGTCAGGGAATGGAGGATCTGAGGCAGGTTTGGGTAAAGATGGTGGCTTGTTTTCTCCTCGAGGTGGCACTAACCCACAAACATGTTTAGGTGCTTCCCTTGCCAAAGATGGCATCCCAAGCTCACCAAAGCCATTGTTGCATGAGAAGAAGCCCCAGATATCTGCTGTTCCTCAGAAGGAACAAGTTGTGGGATGGCCACCAATCAGATCTTTCAGGAAGAACTCGATGGCCTCTAATCCTCAAAAGAACGATGATGATGCAGAAGCCAAGTCTGGATGTCTTTATGTAAAAGTAAGCATGGATGGTGCCCCCTACTTGAGGAAAGTGGATCTCAAAAACTTTGGCAGTTACCAGCAACTTTCTTCAGCACTTGAAAAGATGTTCAGATGTTTTACAATCAGTCAATGTGGATCTCACGGAATTTCAAGTCATGATAATTTGAGTGAAAGTAGGTTGAAGGATCTGCTTCATGGCTCAGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTGCCTTGGGAGATGTTCACTGCCTCTTGCAAGAGATTGAGGATCATGAAGAGTTCTGAAGCGATTGGCCTAGCACCAAGAGCAATGGAAAAGTGCAAAAGCCGAAACTAG 891 0.477 MSVPQEQDYVGLTELPSMEKGSDKFSQRSNSGLNLKATELRLGLPGSESPERDGAGAGKSAAVCGAKRGFSDTINGGSGKWAMSGNGGSEAGLGKDGGLFSPRGGTNPQTCLGASLAKDGIPSSPKPLLHEKKPQISAVPQKEQVVGWPPIRSFRKNSMASNPQKNDDDAEAKSGCLYVKVSMDGAPYLRKVDLKNFGSYQQLSSALEKMFRCFTISQCGSHGISSHDNLSESRLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTASCKRLRIMKSSEAIGLAPRAMEKCKSRN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral706g00001 296 MobiDBLite consensus disorder prediction 73 104 - -
Pral706g00001 296 FunFam Auxin-responsive protein 171 288 - -
Pral706g00001 296 SUPERFAMILY CAD & PB1 domains 173 277 - -
Pral706g00001 296 Gene3D - 170 290 - -
Pral706g00001 296 MobiDBLite consensus disorder prediction 1 60 - -
Pral706g00001 296 ProSiteProfiles PB1 domain profile. 176 278 IPR000270 GO:0005515
Pral706g00001 296 MobiDBLite consensus disorder prediction 20 36 - -
Pral706g00001 296 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 283 IPR003311 GO:0005634|GO:0006355
Pral706g00001 296 Pfam AUX/IAA family 38 287 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral706g00001 Pral-Chr706 5189 7854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral706g00001 153 294 B3 DNA Binding Superfamily AT1G19850 29.577 1.38e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Pral706g00001 AUX_IAA 1.5e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral706g00001 K14484 - gmx:100803754 438.728