Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral705g00003 ATGGCCGGCCTTGAGTCGCCTGACCTTCACACTCCGACATTAGACAGGGAGTCTTCGGGGCTTATTCAGTCCATTTCCGAGCACGGAGGCTACGCTTATGTCAGGATGGCGTTCTTGGCGGCCGCTGGTGACTTTCGCGCTGCTGAAGCGGCTCGCGAGATGGCGTGGGAGCAGCTTCACTCGGGGCCCTGGCACTCTGTCCTCCCTGTGTGGCGTGATGCATATTCTATGGCTTGCCTCCTCGTGGCCAAGTGCCATTATAGAATTGGTGAGTTCAAGGAGGCCCTCAAGTCTTTGGATATGGGTCTGATCATGGGAGGGATGCTTCTAAGGAAGGATTTGGACTCCGCTGTTGAGAAAGTTTCGATAAAGGTCAGAAACATTGGGGTTTCTGAAGATTGCTATGAAGGTCTGGAAAAGCATGAGCATCCACTTATTCGTCAGCAACTTAATAACACTGAGGCACTCCAATTTTTACCTTTCAAGTCCTTGTCAAGTAAAACTGTGATGAAGAAGTCGGCTCTGTCATTGGAAAGATTTCTAAAAGACTATTACCTGACTCGTTCCCCAGTTATTATCAGTGATTCTATGGATCACTGGCCAGCCAAGGCAAAATGGAATAACGTAGATTATTTGAAAAGAGTTGCAGGTGACCGCACAATTCCAGTTGAGGTTGGGAAGAACTACTTATGCGCAGAGTGGAAGCAAGAGCTAATTACATTCTCTGAGTTTCTTCAGCGGATTGAATCTCCTGGCTGCGCTTCGTGGGATCCTACATATCTGGCTCAGCATCCATTATTTGATCAGATAACTGAGCTTCGAAAAGATATTTGTATACCAGACTATTGTTTTACTGACGGAGGTGAGCTTAGATCTGTCAATGCTTGGTTTGGTCCAGCTGGGACCGTAACGCCGTTACACCATGATCCACACCATAATATATTAGCGCAGGTTGTTGGAAAGAAATATATCAGGCTTTACTCTGCATCTTTTTGTGAGGAACTTTACCCTTACACGGAAACCATGCTTTGTAATTCCAGCCAGGTGGATTTAGACGATATAGATGAAGTCAAGTTTCCGAAGGTGCAAGACCTGGAATTTGTCGACTGTATTCTAGAAGAAGGGGAAATGCTATATATCCCGCCAGGGTGGTGGCATTATGTCCGATCTCTGACTACCAGTTTATCGGTTAGCTTTTGGTGGAGTGAGGGCGGGAGCTCGCGTGCATCCTGA 1233 0.4704 MAGLESPDLHTPTLDRESSGLIQSISEHGGYAYVRMAFLAAAGDFRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLLVAKCHYRIGEFKEALKSLDMGLIMGGMLLRKDLDSAVEKVSIKVRNIGVSEDCYEGLEKHEHPLIRQQLNNTEALQFLPFKSLSSKTVMKKSALSLERFLKDYYLTRSPVIISDSMDHWPAKAKWNNVDYLKRVAGDRTIPVEVGKNYLCAEWKQELITFSEFLQRIESPGCASWDPTYLAQHPLFDQITELRKDICIPDYCFTDGGELRSVNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSASFCEELYPYTETMLCNSSQVDLDDIDEVKFPKVQDLEFVDCILEEGEMLYIPPGWWHYVRSLTTSLSVSFWWSEGGSSRAS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral705g00003 410 Gene3D Cupin 168 402 - -
Pral705g00003 410 ProSiteProfiles JmjC domain profile. 253 410 IPR003347 -
Pral705g00003 410 Pfam Cupin-like domain 179 403 IPR041667 -
Pral705g00003 410 SMART cupin_9 253 409 IPR003347 -
Pral705g00003 410 FunFam lysine-specific demethylase JMJ30 168 401 - -
Pral705g00003 410 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 73 403 - -
Pral705g00003 410 SUPERFAMILY Clavaminate synthase-like 174 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral705g00003 Pral-Chr705 9930 13542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral705g00003 163 401 Acyl Lipid Metabolism Gene Families AT3G45880 24.739 1.02e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral705g00003 Cupin_8 6.9e-49 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral705g00003 K24444 - qsa:O6P43_000107 623.239