Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral699g00004 ATGATACTGCCCTCATCTGCTTTTCCCATGGCCTTCCCTCCTCACTTTCTGTTTCAGACCCACGAAGATCATGATCAACTCCCTTCCACCTCCATCAACGCCTATAACTCCTTCACACCCAAGTTCTTCGAAGGCGGTGCAGTACCTTTGGTGTTGAAGAGATCCGTGTCATTTTCAGGGATCGAGAACAAGCATGAGGATGAAGAGCTGTCCGATGATGGATCTCAGCTGGGGGAGAAGAAGAAGAGACTGAACATGGAACAAGTGAAGGCACTGGAAAAGAGTTTCGAGTTAGGGAACAAGCTGGAGCCTGAACGCAAAATGCAGCTGGCCAAGGCTCTGGGCCTTCAGCCGAGGCAGATCGCTATTTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAGAAGGAATATGAAGCTCTCAAGAAGAAGTTTGAAGCTCTCAAGGCTGACAACGATGCCCTTAAGGCTCATAACCACAAATTACACGCTGAGATACAAGCTTTAAGGGGGAGAGATTGCTGTGAGGGCGGAACTATCAATAAGAAAGAACCAGAGGCTTGTTGGAGCAACGGGAGTACTGAGAATAGCTCGGATATTAACTTGGATCTCTCAAGATCACAATTTCTAAACAGTACTCTAACTTCAGTACAGAATGGTAAAAGCCTTCTTCCCTCTAATGCCCTTAAGCCAACCAGCATAACCCAGCTCCTCCAATGCTCATCCAGATCAGAACTTCAAGATGAAAGCTTGTCCAACATGTTTCATGGCGGCGTCGACGAGCACCAGAATTTCTGGCCCTGGCCTGACCACCACCAGTTTCATTGA 837 0.4803 MILPSSAFPMAFPPHXFLFQTHEDHDQLPSTSINAYNSFTPKFFEGGAVPLVLKRSVSFSGIENKHEDEELSDDGSQLGEKKKRLNMEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKKKFEALKADNDALKAHNHKLHAEIQALRGRDCCEGGTINKKEPEACWSNGSTENSSDINLDLSRSQFLNSTLTSVQNGKSLLPSNALKPTSITQLLQCSSRSELQDESLSNMFHGGVDEHQNFWPWPDHHQFH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral699g00004 279 Coils Coil 128 162 - -
Pral699g00004 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 58 226 IPR045224 GO:0003700
Pral699g00004 279 Gene3D - 73 146 - -
Pral699g00004 279 SMART HOX_1 79 140 IPR001356 GO:0003677
Pral699g00004 279 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Pral699g00004 279 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Pral699g00004 279 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Pral699g00004 279 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Pral699g00004 279 SUPERFAMILY Homeodomain-like 73 138 IPR009057 -
Pral699g00004 279 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Pral699g00004 279 CDD homeodomain 81 137 IPR001356 GO:0003677
Pral699g00004 279 Pfam Homeobox associated leucine zipper 136 175 IPR003106 GO:0006355|GO:0043565
Pral699g00004 279 FunFam Homeobox-leucine zipper protein ATHB-13 73 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral699g00004 Pral-Chr699 53180 55585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral699g00004 10 274 Homeobox Transcription Factor Family AT3G01220 53.430 4.23e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral699g00004 Homeodomain 5.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral699g00004 K09338 - gmx:100790803 359.762