Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral699g00003 ATGGATGGTGCTTCGGACCTCGGAAAATCAAAGGGAAAGAAGAAGAATGACGTCGAATCTAGAAGTCCGAAATGGTGGATGAAATTAAGCTCTATCGTCGGAAGCTGCTTATTTTTAAAGCCCAAAGAGGACGGCTCTGCAGAAAGCAACTCTACCAGAAAATCGGATTCAGCTGCATCTTCCTTATCGTACTTCGAGGAAATAAAATTCTCTTCCTATCTTAGAAGGTTTTCTTTTGATGAGCTCAAGGAAGTCACAAACAACTTTAGACCTAGCAGCATTCTTGGCCAGGGGGGTTTTGGTTGTGTTTTTAAAGGTCTGATCAAACAAGCAAGATCAACGGGCTCGGGAATTCCAGTTGCAGTGAAGATACTTAACCATGGAGGACTTCAAGGCCACAAAGAATGGCTTACTGAAATTAATTATCTTGGCGAACTCCAGCATCCGAATCTAGTGAAATTAATAGGTTACTGTATTGAGGAAGAAAAAAGGCTGCTTGTGTACGAGTTCATGCCTCGAGGAAGCTTGGACAACCACCTGTTTAGGAGGTCAACGCCTCTTCCATGGTCGATCAGATTGAAGATTGTGGTTGGTGCTGCGAAGGGGCTTGCGTTTCTGCATGAAGAAGCTGACAGAACAGTGATCTTTAGGGACTTCAAAACATCCAATATCCTGCTGGATGCGGATTATAATGCAAAACTTTCTGATTTCGGGCTTGCCAAGGACGGTCCGGAGGGGGACTCAACTCATGTGTCCACTCGAGTCATGGGAACATTTGGGTATGCGGCTCCCGAGTATGTCATGACAGGACACCTTTCTGTGAAGAGTGATGTGTACAGTTTCGGGGTAGTTCTGCTAGAATTGCTGACTGGTCGAAAGGCCATGGACAAGAATCGTCCCCGAGGCGAGCACAGTTTGGTCGAATGGGCAAGGCCCATATTTGCTGACAGAAGGAGATTCTACAGGCTGATGGATCCTCGTCTTCAAGGTCACTACTCTATCAGAGGAGCTCAGGCGGCGTCCCACGTCGCAGCTCGTTGCCTTGCCCGCCACCCCAAAGCAAGACCAGTCATGTCTGAGGTTGTTGCAATCTTAGAGCCTTTGCTTGAACTCAACGATACGTATCTCACTGCTTCAACCTCTTTCCAGTCCAATATGGCTGCTCACGGCCTATCACAGCCCGGCTCGTCCTCCTCCAGGAGCTTACCCAGCCCGTCCTCCTCCAGGAGCTTACCCAACTCGCCCTTTCGCCCTTACTATCCGCTTCCCTATCCCAGTCCTAAGACCAGTATTCCATGA 1299 0.4827 MDGASDLGKSKGKKKNDVESRSPKWWMKLSSIVGSCLFLKPKEDGSAESNSTRKSDSAASSLSYFEEIKFSSYLRRFSFDELKEVTNNFRPSSILGQGGFGCVFKGLIKQARSTGSGIPVAVKILNHGGLQGHKEWLTEINYLGELQHPNLVKLIGYCIEEEKRLLVYEFMPRGSLDNHLFRRSTPLPWSIRLKIVVGAAKGLAFLHEEADRTVIFRDFKTSNILLDADYNAKLSDFGLAKDGPEGDSTHVSTRVMGTFGYAAPEYVMTGHLSVKSDVYSFGVVLLELLTGRKAMDKNRPRGEHSLVEWARPIFADRRRFYRLMDPRLQGHYSIRGAQAASHVAARCLARHPKARPVMSEVVAILEPLLELNDTYLTASTSFQSNMAAHGLSQPGSSSSRSLPSPSSSRSLPNSPFRPYYPLPYPSPKTSIP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral699g00003 432 PANTHER OS01G0588500 PROTEIN-RELATED 51 368 - -
Pral699g00003 432 FunFam Probable serine/threonine-protein kinase PBL8 171 385 - -
Pral699g00003 432 ProSiteProfiles Protein kinase domain profile. 89 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral699g00003 432 MobiDBLite consensus disorder prediction 416 432 - -
Pral699g00003 432 ProSitePatterns Protein kinases ATP-binding region signature. 95 123 IPR017441 GO:0005524
Pral699g00003 432 MobiDBLite consensus disorder prediction 1 21 - -
Pral699g00003 432 CDD STKc_IRAK 95 368 - -
Pral699g00003 432 SUPERFAMILY Protein kinase-like (PK-like) 63 365 IPR011009 -
Pral699g00003 432 FunFam Serine/threonine-protein kinase BIK1 56 170 - -
Pral699g00003 432 Pfam Protein tyrosine and serine/threonine kinase 93 364 IPR001245 GO:0004672|GO:0006468
Pral699g00003 432 Gene3D Phosphorylase Kinase; domain 1 69 170 - -
Pral699g00003 432 MobiDBLite consensus disorder prediction 387 432 - -
Pral699g00003 432 Gene3D Transferase(Phosphotransferase) domain 1 171 386 - -
Pral699g00003 432 MobiDBLite consensus disorder prediction 387 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral699g00003 Pral-Chr699 42707 47436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral699g00003 66 365 Glycoside Hydrolase AT3G07070 51.485 4.52e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral699g00003 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral699g00003 - - sly:101257072 518.079