Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral697g00005 ATGGCAAGTAACCAAGGAGGATCTTCTTCAAACTCTTCCAACTCCAATTCAACCCAAAGAACTTGGAACTATGACATCTTCTTGAGTTTTAGGGGTGAAGACACTCGTAAAGGCTTTACTGACCACTTGTACCATGCACTAAAGAGGAGTGGGTTCAGGGTTTTCAGAGATGATGAAGAACTTGAGAGAGGAGAAGTCATTTCCGAAGAACTCAAACAAGCAATTGAGGATTCTCTGTTTGCAATTGTTGTTCTCTCAAAAAAGTATGCCTCTTCTTCATGGTGTTTACAGGAGCTTGAACATATTCTTCACTCAAGAAACAATTTGTCTCAACAAGTTTTTCCCATATTTTATGATGTAAATCCATCTGATGTACGGCATCAAAGAGAAAGTTTTGCCGAAGCTTTTACTAGGCATCAGAAGCTTCAAAGGGACAATGAGGTCATGAAAAGTTGGAGAGATTCTCTCACGAAGGTTTCAAACTTATCTGGTTGGGATTGCAAGGATCGGTCTGAAGCAGAACTTGTTGACACAGTGGTTGAGGAGCTGTGGACCAAATTACGTCCTAGACTGCCACATTATACTGAAGGACTTATTGGAATTGATAATAAAGTGGAACAACTGGAGCCACTATTGGACATAGGTTCGAATGATGTTCGGTTTGTAGGAATATGGGGCTTAGGGGGTGTTGGGAAGACAACAATTGCTAGGGTTGTTTTTGAGAAATATCGTAGCCAATTTGATATTAGTTGCTTTCTTCACAATGTCAGGGCAGTATCAGAAAAAGATGGTGGTGAGGTTCAGTTACAAAGCCAACTGCTTTCACATCTCAAAATAAGAAACATGGAAATTGAAAACAGCTATGAAGGGAAGAAAATAATCCAAAACCGTTGTTCCAATAAAAAAGTTTTACTTATCCTTGATGATGTTAGTCGTATAGCCCATCTAGAAAATTTGGCTAATAGCCCAAATTGGTTTGGTGCTGGGAGTAGAGTGATCATAACAACTAGGCATTTAGACTTGTTGCGTGGATCACGTGTAGCATATCAACATGAGGTTCAAACTATGGACCCAAATGAAGCCCTTCAACTCTTTTGTCAAAAAGCATTTGGGAGAAGTGAGCCTCAGGAGGATCTATTGGAGCTGTCTAAAATTATTTGTGATTATGCAGGAGGCCTTCCTTTAGCTCTCTCTACTTTGGGCTCCTCTTTCTCTGGAAGAAGTACTGCGCAATGGAAAGATGCTTTGGATATGTTGAAGAAAGATCCGAACAAAGATATTTTCAGGATACTTAAAATAAGTTTTGATGCATTAACCGATACAGAACAAACAATATTTTTAGATATTGCTTGCTTCTTCAATGGTTGCAGTGAAAACAAAATAACAAAAGTATTAGAAAGTTGTGGCTTTGCTGCAAAAATTGGAATAACAACTCTCCAGGAAAAGTCTATGCTAAAGACATATGATGATATTTTAGTGATGCATGATTTGGTGGAACAAATGGGTAGGAAAATTGTTGTGGAGAAGTCTTCTAATTATATTGGAAATCGTAGTAGATTGTGGACTAATGAAGACATTGATAAAGTTATGGAAAACAATTTGGTGAGTATCGATCTTATCTCTTATTGGTTTTAA 1635 0.3804 MASNQGGSSSNSSNSNSTQRTWNYDIFLSFRGEDTRKGFTDHLYHALKRSGFRVFRDDEELERGEVISEELKQAIEDSLFAIVVLSKKYASSSWCLQELEHILHSRNNLSQQVFPIFYDVNPSDVRHQRESFAEAFTRHQKLQRDNEVMKSWRDSLTKVSNLSGWDCKDRSEAELVDTVVEELWTKLRPRLPHYTEGLIGIDNKVEQLEPLLDIGSNDVRFVGIWGLGGVGKTTIARVVFEKYRSQFDISCFLHNVRAVSEKDGGEVQLQSQLLSHLKIRNMEIENSYEGKKIIQNRCSNKKVLLILDDVSRIAHLENLANSPNWFGAGSRVIITTRHLDLLRGSRVAYQHEVQTMDPNEALQLFCQKAFGRSEPQEDLLELSKIICDYAGGLPLALSTLGSSFSGRSTAQWKDALDMLKKDPNKDIFRILKISFDALTDTEQTIFLDIACFFNGCSENKITKVLESCGFAAKIGITTLQEKSMLKTYDDILVMHDLVEQMGRKIVVEKSSNYIGNRSRLWTNEDIDKVMENNLVSIDLISYWF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral697g00005 544 Gene3D - 186 349 IPR027417 -
Pral697g00005 544 ProSiteProfiles TIR domain profile. 22 187 IPR000157 GO:0007165
Pral697g00005 544 SMART till_3 23 162 IPR000157 GO:0007165
Pral697g00005 544 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Pral697g00005 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Pral697g00005 544 Gene3D - 356 439 IPR042197 -
Pral697g00005 544 Gene3D - 16 185 IPR035897 -
Pral697g00005 544 PRINTS Disease resistance protein signature 221 236 - -
Pral697g00005 544 PRINTS Disease resistance protein signature 390 404 - -
Pral697g00005 544 PRINTS Disease resistance protein signature 297 311 - -
Pral697g00005 544 Pfam NB-ARC domain 203 427 IPR002182 GO:0043531
Pral697g00005 544 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 188 - -
Pral697g00005 544 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 530 IPR044974 GO:0006952
Pral697g00005 544 SUPERFAMILY "Winged helix" DNA-binding domain 426 530 IPR036390 -
Pral697g00005 544 Pfam TIR domain 23 192 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral697g00005 Pral-Chr697 173101 175548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral697g00005 23 533 WRKY Transcription Factor Family AT4G12020 29.014 8.90e-57 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral697g00005 - - pcin:129302825 657.521