Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral697g00001 ATGGCAAGCAACCAAGGAGGATCTTCTTCAAATTCTTCCAACTGCAATTCAACCCAAAGAACTTGGAAGTATGACATCTTCTTGAGTTTTAGGGGTGAAGACACTCGTAAAGGCTTCACTGGCCACTTGTACCATGCACTAGATAGGAGTGGGTTCAAGGTTTTCATAGATGATGAAGAACTTGAGAGAGGAGAGGTCATTTCCAAAGAACTCAAACAAGCAATTGAGGATTCTCAGTTTGCAATTGTTGTTATCTCGAAAAACTATGCCTCTTCTTCATGGTGTTTAGATGAGCTTAAACATATTCTTTACTCAAGAAACAATTTGTCTCAACAAGTTTTCCCCATATTTTATGATGTAAATCCATCTGATGTAAGGCATCAAAGAGGAAGTTTTGCCAAAGCTTTTGCTAGGCATGGGATGCTTCAAAGGGGCGATGAGGTCATGAAAAGTTGGAGAGATTCTCTCAAGGAGGTTTCAGACTTATCTGGTTGGGATTGCAATAAGAATCAGTTTGAAGCAAAACTTATTGAGACAGTGGTTGACGAGCTATGGAGCAAATTTCGTCCTAGACTGCCACTTTATACTGAAGGACTCATTGGAATTGACAATAAAGTGAAACAACTGGAGCCATTGTTGGAGATAGGTTCGTATGGTGTTCGGTTTGTAGGAATATGGGGCTTAGGGGGTGTTGGGAAGACAACAATTGCTTTGGCTATTTTTGAGAAATATCGTAGCCAATTTGATATTAGTTGCTTTCTTCACAATGTTAGGACAGCTACAAAAAGAGATGGTGGCGAGGTTCAGTTACAAAGTGTATTTCTTTCAAATCTCAAAAGCAAAAAGATGAAAATTGAAAACAGCTATGAAGGGAGGAAAATAATCCAAAACTGTTGTTGCAATAAAAAGGTTTTACTTATCCTTGATGATGTTAGCCATACAAGCCATCTAGAAAATTTGGCTAATAGCCCAAACTGGTTTGGTGCTGGGAGTAGAGTGATCATAACAACTAGGCATTTAGACTTGTTGCGTGGAGCGCATGTAGCATATCAACATGAGGTTGAAACTATGAACCCAAGTGAAGCCCTTCAACTCTTTTGTCAGAAAGCATTTGGAAGAAGTGAGCCTCAGGAGGATCTGTTGGAGCTATCTAAAATTGTTTGTGATTATGCAGGAGGCCTTCCTTTAGCTCTCTCTGTTTTGGGCTCCTTTTTCTGTGGAAGAAGTACTGTGCAATGGGAAGATGCTTTGGATATGTTGAGGAAAGATGCTTTGGGAATGTTGAAGAATGATCCCGATAAAGATATTTTTGGAATACTTAAAATAAGTTTTGATGCATTACCTAATACAATACAAGCAATATTTTTAGATATTGCTTGCTTCTTCAATGGTTGGAGCAAAAACAAAATAACACAAATATTGGAAAGTTGTGGTTTTAATGCAAAAATTGGAATAGCAATTCTCCAAGAAAAGTCTATGCTAAAGAACTATGACAATAAGTTAGTGATGCATAATTTGGTGGAACAAATGGGTAGGAAAATTGTTGTGGATAAGTCTTCTAATGATGTTGGAAATCGTAGTAGATTGTGGACTAATGAAGATATTGATAAATTTATGCAAAACAATTGGGTGAGTATCGATCTTATCTCTAATTGGTTTTAA 1662 0.3748 MASNQGGSSSNSSNCNSTQRTWKYDIFLSFRGEDTRKGFTGHLYHALDRSGFKVFIDDEELERGEVISKELKQAIEDSQFAIVVISKNYASSSWCLDELKHILYSRNNLSQQVFPIFYDVNPSDVRHQRGSFAKAFARHGMLQRGDEVMKSWRDSLKEVSDLSGWDCNKNQFEAKLIETVVDELWSKFRPRLPLYTEGLIGIDNKVKQLEPLLEIGSYGVRFVGIWGLGGVGKTTIALAIFEKYRSQFDISCFLHNVRTATKRDGGEVQLQSVFLSNLKSKKMKIENSYEGRKIIQNCCCNKKVLLILDDVSHTSHLENLANSPNWFGAGSRVIITTRHLDLLRGAHVAYQHEVETMNPSEALQLFCQKAFGRSEPQEDLLELSKIVCDYAGGLPLALSVLGSFFCGRSTVQWEDALDMLRKDALGMLKNDPDKDIFGILKISFDALPNTIQAIFLDIACFFNGWSKNKITQILESCGFNAKIGIAILQEKSMLKNYDNKLVMHNLVEQMGRKIVVDKSSNDVGNRSRLWTNEDIDKFMQNNWVSIDLISNWF 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral697g00001 553 PRINTS Disease resistance protein signature 222 237 - -
Pral697g00001 553 PRINTS Disease resistance protein signature 298 312 - -
Pral697g00001 553 PRINTS Disease resistance protein signature 391 405 - -
Pral697g00001 553 Gene3D - 190 351 IPR027417 -
Pral697g00001 553 SUPERFAMILY "Winged helix" DNA-binding domain 435 538 IPR036390 -
Pral697g00001 553 Gene3D - 356 448 IPR042197 -
Pral697g00001 553 ProSiteProfiles TIR domain profile. 22 180 IPR000157 GO:0007165
Pral697g00001 553 Gene3D - 17 189 IPR035897 -
Pral697g00001 553 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Pral697g00001 553 Pfam NB-ARC domain 210 445 IPR002182 GO:0043531
Pral697g00001 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 536 IPR044974 GO:0006952
Pral697g00001 553 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 165 IPR035897 -
Pral697g00001 553 Pfam TIR domain 23 187 IPR000157 GO:0007165
Pral697g00001 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 458 IPR027417 -
Pral697g00001 553 SMART till_3 23 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral697g00001 Pral-Chr697 78681 81151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral697g00001 200 541 WRKY Transcription Factor Family AT5G45050 33.041 1.01e-51 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral697g00001 - - pcin:129302825 631.328