Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral696g00002 ATGGAGTCACATCTTCTTGACGACTCACGCATATATGAGTGTAAAATCCATTCATGGGGCGAAGCTCCTTATTATATCAAGTTCGATTTTTTAGATGGGAATCCAGCACTTCCTCCCTCTGGTAGATGCTTCAATATCAGAACTTTTTTAGAAGAACGCTATTACAGCCATGCTTCAAACATGCATCTTACTAGTGCAGCACATACCCATGCTGCTAGATATGATTTTTTCAACATCTCAATCAAGTCAATAAAGCAAGCCACAAATTACATTCTTTCTATTCTTAATGTTCCTGAAAAAAATCAGAAATCTATGGCACAACAGATTTTAAATTTCGTAGAAAACATGGCAAACAACACACACCCAAGTTTTCGTATGATGTTTATGATTGTGATGGTGAATGCTGACATTTTTTACCACAACAATGACAACTACGATCAAGCTACAGAAATATCTATGAAAGATCAGCTTTGCTTGGCAAAGCTTGCAACTGAAGCATCCAACAATAAATTGAAGGGAGTGAAGCTTCAACAAGAAGAAGGGTTGGATGCTTGTCCAATTTGTTTAGAAGATTTCAGGATTGATGCAGTTCAAATGCCTTGTTCCCATTTTTTTCATGGAAATTGCATTGTTAACTGGTTGTTGAAGAAGAATAATTGCCCTATATGTCGCTTGGCAATTCCATCAAGTGGTGAACTTCCTTGA 705 0.3702 MESHLLDDSRIYECKIHSWGEAPYYIKFDFLDGNPALPPSGRCFNIRTFLEERYYSHASNMHLTSAAHTHAARYDFFNISIKSIKQATNYILSILNVPEKNQKSMAQQILNFVENMANNTHPSFRMMFMIVMVNADIFYHNNDNYDQATEISMKDQLCLAKLATEASNNKLKGVKLQQEEGLDACPICLEDFRIDAVQMPCSHFFHGNCIVNWLLKKNNCPICRLAIPSSGELP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral696g00002 234 ProSiteProfiles Zinc finger RING-type profile. 185 224 IPR001841 -
Pral696g00002 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 232 IPR013083 -
Pral696g00002 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 101 226 - -
Pral696g00002 234 SUPERFAMILY RING/U-box 184 228 - -
Pral696g00002 234 CDD RING-H2_PA-TM-RING 185 224 - -
Pral696g00002 234 Pfam Ring finger domain 184 224 IPR001841 -
Pral696g00002 234 SMART ring_2 185 223 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral696g00002 Pral-Chr696 6933 7637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral696g00002 159 224 C3H Transcription Factor Family AT4G12190 39.437 3.01e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral696g00002 - K22378 pcin:129316560 107.842