Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral693g00001 ATGGGAAGAGCTCCCTGTTGCGACAAAGCTAGTGTGAGAGGACCATGGTCTCCTGAAGAAGATGCCACCCTCAAGAACTACCTCCAGAAGCATGGCACCGGTGGCAATTGGATCGCTCTCCCCAAAAAAGCTGGTCTTAAGCGTTGCGGGAAGAGCTGTCGTCTGAGATGGCTCAATTATCTTAGGCCTCATATAAGGCTTGGAGGGTTTACTGACGACGAAGACAAAATTATCTGCACTCTCTATGCTACCCTTGGTTCTTTTGTCATTAGGTGGTCTCTTATAGCTGCTCAGTTGCCTGGAAGAACGGACAACGATGTGAAAAACCACTGGAACACAAAGTTGAAGAAGAAGTTGGTTGGCAGAAAAGAACGATCATCCCAAGTGGGTTGGCTTTAA 399 0.4762 MGRAPCCDKASVKXGPWSPEEDATLKNYLQKHGTGGNWIALPKKAGLKRCGKSCRLRWLNYLRPHIRLGGFTDDEDKIICTLYATLGSFVIRWSLIAAQLPGRTDNDVKNHWNTKLKKKLVGRKERSSQVGWL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral693g00001 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Pral693g00001 133 ProSiteProfiles Myb-like domain profile. 63 116 IPR001005 -
Pral693g00001 133 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pral693g00001 133 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Pral693g00001 133 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pral693g00001 133 CDD SANT 71 116 IPR001005 -
Pral693g00001 133 SUPERFAMILY Homeodomain-like 12 112 IPR009057 -
Pral693g00001 133 CDD SANT 16 62 IPR001005 -
Pral693g00001 133 FunFam Transcription factor RAX3 7 68 - -
Pral693g00001 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Pral693g00001 133 SMART sant 13 64 IPR001005 -
Pral693g00001 133 SMART sant 67 118 IPR001005 -
Pral693g00001 133 Gene3D - 7 67 - -
Pral693g00001 133 Gene3D - 70 130 - -
Pral693g00001 133 PANTHER OS09G0431300 PROTEIN 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral693g00001 Pral-Chr693 579 1463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral693g00001 1 126 MYB Transcription Factor Family AT5G57620 74.603 1.18e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral693g00001 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral693g00001 K09422 - gmx:778160 234.187