Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral689g00004 ATGGGTGTTTGTTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGCAACACAGGGTTAAATTCGAAATATGTGAGCGGTGACGGAAAGGGTGCTAGCAGCGCAGGCAGCAATATGTCAGCAGTGTCGGTTCCTCAGACTCCAAGGAGTGAGGGAGAGATCTTGCAGTTATCCAATTTAAAGAGTTTCACTTTAGCAGAGTTGAAGACGGCCACCAGAAATTTCCGACCAGATAGTGTGTTAGGAGAAGGTGGCTTTGGATCAGTGTACAAAGGGTGGATCGATGAGCACACTCTGATCCCTGCCAAACCCGGGACTGGCATGGTTATTGCTGTCAAGAGACTTAATCAAGATGGTTTACAAGGTCACAAGGAGTGGTTGGCGGAAGTGAATTACCTTGGACAGCTTTCTCATCCTCATCTCGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTCTATGAATTCATGCCTCGAGGCAGCCTGGAGAACCATTTGTTCAGAAGAGGTTCATATTTCCAGCCTCTCTCCTGGAGCCTCCGGATGAAGGTTGCTCTTGGTGCTGCCAAAGGCCTCGCGTTTCTTCACAGCAGCAACATAAAAGTGATATACCGGGATTTCAAGACTTCGAATGTCCTACTAGATTCAAAACATAATGCAAAACTCTCTGATTTCGGGCTGGCAAAAGATGGACCAACGGGCGACAGGAGTCACGTCTCCACCAGGGTCATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGCCACCTCACAGCCAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTGCTGGAAATGTTATCGGGGCGACGAGCTGTTGATAAGAACAGGCCATGTGGTCAGCACAATTTGGTGGAATGGGCTAAGCCATGTCTGGCAAACAAACGAAAGATCTTTCGCATTATGGACTGTCGTCTAGAAGGTCAGTATTCAATCGATGAGGCTCATAAGACAGCAATGCTGGCGCTGCGGTGCCTCTCCGGCGAGCCCAAAATAAGGCCTGACATGGATGAGGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCCGCCGATGAAAATGGAACCCGTCACAACCCTCGGCCTCGTGGCCGCAGAAGAAGCGCCGATGACTTTAACGGTCGGAGGGCTTATCCCAGGCCCTCTGCTTCTCCCCTCTACGCTTGA 1203 0.4954 MGVCLSAQIKAESPCNTGLNSKYVSGDGKGASSAGSNMSAVSVPQTPRSEGEILQLSNLKSFTLAELKTATRNFRPDSVLGEGGFGSVYKGWIDEHTLIPAKPGTGMVIAVKRLNQDGLQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAAKGLAFLHSSNIKVIYRDFKTSNVLLDSKHNAKLSDFGLAKDGPTGDRSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLANKRKIFRIMDCRLEGQYSIDEAHKTAMLALRCLSGEPKIRPDMDEVVKALEQLQVSADENGTRHNPRPRGRRRSADDFNGRRAYPRPSASPLYA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral689g00004 400 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral689g00004 400 Gene3D Phosphorylase Kinase; domain 1 50 159 - -
Pral689g00004 400 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Pral689g00004 400 SUPERFAMILY Protein kinase-like (PK-like) 49 356 IPR011009 -
Pral689g00004 400 Gene3D Transferase(Phosphotransferase) domain 1 160 375 - -
Pral689g00004 400 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Pral689g00004 400 MobiDBLite consensus disorder prediction 368 386 - -
Pral689g00004 400 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Pral689g00004 400 MobiDBLite consensus disorder prediction 359 400 - -
Pral689g00004 400 FunFam Probable serine/threonine-protein kinase PBL8 160 375 - -
Pral689g00004 400 MobiDBLite consensus disorder prediction 27 47 - -
Pral689g00004 400 CDD STKc_IRAK 80 359 - -
Pral689g00004 400 PANTHER OS01G0588500 PROTEIN-RELATED 45 360 - -
Pral689g00004 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral689g00004 Pral-Chr689 22682 25237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral689g00004 60 364 Glycoside Hydrolase AT3G07070 51.961 7.39e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral689g00004 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral689g00004 - - cave:132163413 645.58