Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral685g00004 ATGGAGGGCAGTGACGCAAACACTCCTCTCTCACAATCCCCCACTAATTCCTCCTCTTGGCCTCCCACCACCCCACACCCCCAAGTGATCGCCAGCCCTTGTGCTGCTTGCAAGATTCTGAGGCGTCGATGTGCCGACAAATGCGTCTTGGCTCCCTATTTCCCTCCCACCGACCCTGCCAAGTTCACCATCGCCCACCGCGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCCGAGAGTCAGAGAGCTGATGCGGTGAGCAGTATGGTGTACGAGGCAAGTGCGAGAATAAGAGACCCCATATATGGTTCCGCTGGTGCAATATGCCAGCTTCAGAAGCAAGTCAATGAGCTTCAGGCGCAACTTGCCAAGGCTCAAGCGGAGCTCGTCAACATGCAATTACAGCAAGCCAATCTGGTGGCTCTGATTTGCATGGAAATGTCGCCGGCCTCTTCCACTCCTCAGGAATCTCAATCGCCTCAGCATTCCGTGGACGATTTCATTTCCACTCCTCCCCACACCAGCGCTTATCAGAGCAATCTCAACTTCTTCGACGACAACGCCGGCTTTAACTCTCTTTGGGAGCCGCTGTGGACATGA 612 0.5458 MEGSDANTPLSQSPTNSSSWPPTTPHPQVIASPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPIYGSAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMEMSPASSTPQESQSPQHSVDDFISTPPHTSAYQSNLNFFDDNAGFNSLWEPLWT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral685g00004 203 MobiDBLite consensus disorder prediction 155 175 - -
Pral685g00004 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 165 - -
Pral685g00004 203 MobiDBLite consensus disorder prediction 1 25 - -
Pral685g00004 203 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Pral685g00004 203 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Pral685g00004 203 Coils Coil 112 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral685g00004 Pral-Chr685 21390 22535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral685g00004 29 203 AS2 family AT2G28500 66.486 3.18e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral685g00004 LOB 1.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral685g00004 - - gmx:100797804 285.804