Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral683g00003 ATGTATGGATTTGCTCTGCCTCTAACTGGAAACAATTTCCTTTACCGGGCTAAACTGTGTTTTAGATCCATCGGACCTTCCTTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTGCATTCGGTCGTCGACGTGATTTTAATCCCGTCCTATTCCAGTCGGAATCCGTTTTTCCTTCCTGCTGGAACTATAAGCATACAAGAGGTAGCATCATTCTTCTGAAAGCCAGCCGTCGGGAGTCTCCTTACGAAGTTTTGGGCGTATCTCCATCAGCTACAGCAGATGAGATCAAAAGGGCATACAGAAAGCTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGACAAGGCGCAGGAGAAGTTTATGAGGATAAAACACGCATACAATACATTGATAAATTCTACTTCGCGTAGAAAATTTGATTCTGGAAATGGTGGTTCCGATTCTTATTATTCCTCTCAGAGAAGCCAAAGTGGTGATGCAAAAGTAGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGGGGAGTTTTTCAAAGATGTTCAAGAAGAATTCAGGAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAAAGCCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTGGAGAAAGAACTTGATATAGTTGATCCGGAAGTTGATTCGGGTGATAATTATCAAAAGCCTCGGGGAGGAAATCCTTCTCGTACTTCTGCTGGCAGTGGCCCTCAAGATGAAAGTGGCAAGGGGAACAGCAGCATCAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGTTTGTAG 876 0.4167 MYGFALPLTGNNFLYRAKLCFRSIGPSLLLQNLANSSLPNSAFGRRRDFNPVLFQSESVFPSCWNYKHTRGSIILLKASRRESPYEVLGVSPSATADEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRRKFDSGNGGSDSYYSSQRSQSGDAKVEEEFYGLGNFLRDVQITIGEFFKDVQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELDIVDPEVDSGDNYQKPRGGNPSRTSAGSGPQDESGKGNSSIKDNLDEIEATLAQLKKELGL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral683g00003 291 MobiDBLite consensus disorder prediction 245 268 - -
Pral683g00003 291 Pfam DnaJ domain 84 144 IPR001623 -
Pral683g00003 291 MobiDBLite consensus disorder prediction 234 275 - -
Pral683g00003 291 MobiDBLite consensus disorder prediction 141 160 - -
Pral683g00003 291 Gene3D DnaJ domain 80 206 IPR036869 -
Pral683g00003 291 SUPERFAMILY Chaperone J-domain 79 150 IPR036869 -
Pral683g00003 291 SMART dnaj_3 82 139 IPR001623 -
Pral683g00003 291 PRINTS DnaJ domain signature 85 103 IPR001623 -
Pral683g00003 291 PRINTS DnaJ domain signature 103 118 IPR001623 -
Pral683g00003 291 PRINTS DnaJ domain signature 119 139 IPR001623 -
Pral683g00003 291 Coils Coil 268 288 - -
Pral683g00003 291 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Pral683g00003 291 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Pral683g00003 291 CDD DnaJ 84 136 IPR001623 -
Pral683g00003 291 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral683g00003 Pral-Chr683 14243 16845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral683g00003 79 145 C2H2 Transcription Factor Family AT1G74250 38.356 1.26e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral683g00003 - - qsa:O6P43_028201 369.777