LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral681g00016	ATGCCAAAAGAGTACAGATGGGAAGGGGTGACTTGCAATTACTCTGAGAGCATTCCACGGGTCACTTCTTTGAATATGAGCTCAAGCAAATTGACAGGACAGATTGTAACTTCATTCTCCAATCTCATGACGTTGGAGGCCTTGGATTTGTCGAGCAACAAATTAACAGGACAAATACCAGAATCTTTAGCAGGACTACCCAATTTGAAACTTCTTAATTTGACAGGGAATAATCTCCAAGGCTCAATTCCCGAGGCTCTGAGGGAGAAGTCAACTACTGGTTTAACTTTGATTTTGGATGGAAACCCAGGTCTCTGTCAGAGAGGCTCTTGCAAGAGCAATGCAAAGAAGTTCATAAAACCACTTGTTGCATCCGTAGTTTCTGTGGCAGTTCTTGCAATAATAGTCTACATTTCTTTGATGCTTTACAAAAATAAAAGAAAACATCATAGTGTATTGGCGTCTAAGAAAGAAGGTCAGCTTAAATCAAAGAATCAAGGATTTTCTCAAGCTGAAGTTCGTAGTATTACCAATGACTTTGAAACTGAAATTGGAGAAGGGGGATTTGGGAAGGTGTATCTTGGAAGACTAAAAGATGGTACACAAGTTGCAGTCAAGTTACTTTCTAAGTCATCACAGCAAGGGTTCAATGAGTTTCAATCAGAGGCAAAACTGTTGTCCCTTATTTATCATAAAAATCTTGTTTCTCTCATTGGCTTTTGTGATGATGGTGACTTGAGAGCACTGATTTATGAATACATGGCAAAGGGAAATCTCCGGAACCTACTGTCAGATAAGAACCCAGATATTTTGAAGTGGAATGAGAGACTTCAAATTGCGTCGGATGCAGCATGTGGATTGGACTATCTCCATAATGGTTGCAAGCCACCAATAATTCATAGAGACTTGAAATCTTCAAACATCTTGCTAAGTGAAAACATGCACGCCAAGATTGCTGATTTTGGATTATCTAAAGCTTTTACTAATGATACTGACACTCACATTTCAACTCGCCCAGCAGGCACATTTGGTTACCTCGATCCTGAGTTCCATAGAACTGGAAACTTGAACAAAAGAAGTGATGTTTATAGTTTTGGGATACTTCTACTTGAGCTAATGACTGGCCAGCGAGCAGTAACCGTAACATCTGACAGCACACGTCACATATCTGATTGGGTAAATCCAAAGCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAGGAAAATTCAGCAGTGCTTCAGCATGGAAGTTTCTAGAAATAGCCATGTCTTGCATTACACCAACAGCAATCCAAAGACCTGATATAAGTTCTGTTGTGATTGATCTGAAGCAATGTTTGGCTATGGAAGCATCTGTTGAAAGTGCAGAAAGCAGCAGCTTAATCTCAAGCACTACATTGGAAACAAGTTATTCTCAGTCTGGATCATACTCACCTCCATCTGCTAGGTAG	1464	0.401	MPKEYRWEGVTCNYSESIPRVTSLNMSSSKLTGQIVTSFSNLMTLEALDLSSNKLTGQIPESLAGLPNLKLLNLTGNNLQGSIPEALREKSTTGLTLILDGNPGLCQRGSCKSNAKKFIKPLVASVVSVAVLAIIVYISLMLYKNKRKHHSVLASKKEGQLKSKNQGFSQAEVRSITNDFETEIGEGGFGKVYLGRLKDGTQVAVKLLSKSSQQGFNEFQSEAKLLSLIYHKNLVSLIGFCDDGDLRALIYEYMAKGNLRNLLSDKNPDILKWNERLQIASDAACGLDYLHNGCKPPIIHRDLKSSNILLSENMHAKIADFGLSKAFTNDTDTHISTRPAGTFGYLDPEFHRTGNLNKRSDVYSFGILLLELMTGQRAVTVTSDSTRHISDWVNPKLENGDIQAIVDPRLEGKFSSASAWKFLEIAMSCITPTAIQRPDISSVVIDLKQCLAMEASVESAESSSLISSTTLETSYSQSGSYSPPSAR	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral681g00016	487	ProSiteProfiles	Protein kinase domain profile.	178	451	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral681g00016	487	Pfam	Protein tyrosine and serine/threonine kinase	180	445	IPR001245	GO:0004672\|GO:0006468
	Pral681g00016	487	ProSitePatterns	Protein kinases ATP-binding region signature.	184	206	IPR017441	GO:0005524
	Pral681g00016	487	Pfam	Leucine rich repeat	19	79	IPR001611	GO:0005515
	Pral681g00016	487	PANTHER	OS07G0107800 PROTEIN-RELATED	2	456	-	-
	Pral681g00016	487	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	254	460	-	-
	Pral681g00016	487	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	298	310	IPR008271	GO:0004672\|GO:0006468
	Pral681g00016	487	PRINTS	Leucine-rich repeat signature	66	79	-	-
	Pral681g00016	487	PRINTS	Leucine-rich repeat signature	45	58	-	-
	Pral681g00016	487	SMART	serkin_6	178	451	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral681g00016	487	CDD	STKc_IRAK	184	449	-	-
	Pral681g00016	487	MobiDBLite	consensus disorder prediction	461	487	-	-
	Pral681g00016	487	FunFam	Leucine-rich repeat receptor-like kinase	2	108	-	-
	Pral681g00016	487	Gene3D	Ribonuclease Inhibitor	3	97	IPR032675	-
	Pral681g00016	487	SUPERFAMILY	Protein kinase-like (PK-like)	165	447	IPR011009	-
	Pral681g00016	487	FunFam	receptor-like protein kinase FERONIA	142	253	-	-
	Pral681g00016	487	Gene3D	Phosphorylase Kinase; domain 1	150	253	-	-
	Pral681g00016	487	Gene3D	Transferase(Phosphotransferase) domain 1	254	472	-	-
	Pral681g00016	487	SUPERFAMILY	L domain-like	17	106	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral681g00016	Pral-Chr681	165614	168810	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral681g00016	1	487	Receptor kinase-like Gene Family	AT1G51820	45.776	4.13e-145	427

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pral681g00016		PK_Tyr_Ser-Thr	2.6e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral681g00016	-		-	pcin:129289802	668.692