Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral681g00004 ATGGATGGTCTTCTTCCCTGGGATGCTTCTGAATATGCCACCAATATGCCGATCTTGTGGAACACCCACCAACTAGACATTGAAGAGGAAGCAGGCTACTCCATGCCTCACTTGGATTATCAACCAGCTCAAACAGGTCAATATCACCACAATCTTTATTCAGCTTTTGATCTTGTTCCGGATTATTTCGACACCAATATGGCCGACGACCAGCAGCAACAACAACTCATCAATAATGGAGATGACGGGAATATTTCCATGATTCTCTCTGATAGCTATAGAAGAAACACATGGAACTTCAACAACAATGCTATTTCAGTTTCCCCGGGCGAATCTCAGAAAAGTAATAACGCTTCTGCAACTTCCAATGGTAGCAGAAAGAACAAGGACGACGTCGTTCTATGTAATGTCAGTGAAATTGAAGAGGCCATCTCCCGGAGCACTTCATCACGTCCATGTGTCGTCGTCAATAATATTTCAGAACCTAACAAGCCCAATCATGCAAAAAAGAGTTTTGGGCTTGTTTCATCATCGTCTTCTTCAAACATAAATTTTCAGCAGCCAAACTCAAGCATATCATCTAATTCCAGTAGTATTGGCCAAGAGCCTGATCAAGAGGCTATAGCATTAATGAAGGAGATGATATATAGGGCTGCGGCTTTCAGGCCTGTGAACTTAGGTTTGGAGGTAGTGGAAAAGCCCAGAAGGAAGAATGTGAGAATATCGACAGATCCACAGACTGTGGCAGCAAGGCAAAGGAGAGAGAGAATAAGTGAGAGGATTAGGGTTTTGCAGAAGATAGTGCCTGGTGGAAGCAAGATGGACACAGCTTCAACGCTTGATGAAGCTGCAAATTATCTAAAGTTTCTCAGGTCACAGGTCAAAGCTTTGGAAAGTCTAGGGGACAAGCTTCATTATTCTATGAACTGTACCCCTCTCTCTTTTACAAACTCTAGTCATCAATATTACTTTCAGCAATACCATCCCACCAATTTAGGGAAGGAGAGTTAA 1011 0.4263 MDGLLPWDASEYATNMPILWNTHQLDIEEEAGYSMPHLDYQPAQTGQYHHNLYSAFDLVPDYFDTNMADDQQQQQLINNGDDGNISMILSDSYRRNTWNFNNNAISVSPGESQKSNNASATSNGSRKNKDDVVLCNVSEIEEAISRSTSSRPCVVVNNISEPNKPNHAKKSFGLVSSSSSSNINFQQPNSSISSNSSSIGQEPDQEAIALMKEMIYRAAAFRPVNLGLEVVEKPRRKNVRISTDPQTVAARQRRERISERIRVLQKIVPGGSKMDTASTLDEAANYLKFLRSQVKALESLGDKLHYSMNCTPLSFTNSSHQYYFQQYHPTNLGKES 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral681g00004 336 Pfam Helix-loop-helix DNA-binding domain 251 290 IPR011598 GO:0046983
Pral681g00004 336 Coils Coil 280 300 - -
Pral681g00004 336 SMART finulus 247 296 IPR011598 GO:0046983
Pral681g00004 336 MobiDBLite consensus disorder prediction 106 128 - -
Pral681g00004 336 Gene3D - 246 310 IPR036638 GO:0046983
Pral681g00004 336 MobiDBLite consensus disorder prediction 162 200 - -
Pral681g00004 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 247 308 IPR036638 GO:0046983
Pral681g00004 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 241 290 IPR011598 GO:0046983
Pral681g00004 336 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 82 322 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral681g00004 Pral-Chr681 26944 27954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral681g00004 158 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 64.000 3.69e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral681g00004 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral681g00004 - - pcin:129290347 389.037