Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral680g00004 ATGGAGTTCGCTGCCAAGGTGGGGGAAGCACTTCTCTCTGCTTCTGTGCAGACCTTACTCGACCGGATCTCCTCAAGCGAGTTTCGAGATTTCATGAAAAATAGAAAGCTCAACGTCTCTCTGTTGGATGAGCTGAAGATTACCCTGTTGATGCTTGGTGCTGTCCTTAATGATGCAGAGGAGAAACAGATCACCCGTCCTGAGGTCAAGGAATGGCTTGAAGAGCTGAAAGATGCTATCTATGATGCAGAGGATTTGCTAGATGAGATCAACACTGAGTCTCTGAGATGCAAGGTGGAGCAAGATTCACAAAATGTGGCTAACAAGGTGCGATCCTTCTTTTCTTCTTCTTTTGGTCAATTTTACTGGGGGTTGAACTCCAAGCTAGAAGCAACATCTCGAAGGCTTGAACACTTTGCCAAACGAAAGGATATCCTTGGTTTGCAAAGTGTTAGCTTCAAAGCGCATAAAACACCCACAACATCAGTGGTAAATGAATCTGTTGTGGTTGGTAGAGAGGATGATAAGGAGAAACTATTGAAAATGCTTTTGTGTGATGGAGATCCGAATCCAACTGATGTAGGAGTGGTCACTATCTGGGGTATGGGTGGCCTGGGTAAAACTACCCTTGCTCAACTCCTCTATAATGATAAGAAGGTCCAGGAGCATTTTGATTTGAAGGCTTGGGCTTGTGTTTCAGATGATTTTAATATTCTGGAGGTGACCAAGAATCTTTTTGAGTCCATTACTAAAAAAGTCTACGATGGTAAAAATCTATACCTTCTTCGTGTTGAATTAAGAAATAGCCTGAGTAACAGAAGGTTTTTGATTGTGTTAGATGACTTATGGAATGAAAAATACAGTGATTGGGATGATCTCATAACTCCTTTTCACAATGGGAAAAGGGGAAGCAAGATCATCGTAACAACTCGCCAACCAAGGGTTGCTGAAATCACACATACATTTCCCGTACATAAATTGAGTCATCTCTCAGATGATAACTGTTGGTCTTTAATCTCCAAACATGCATTTGCAAATGTAGATTCAAACAAATATCCAGAGCTAGAAGCAATTGGAAGGAAAATTGCAAGAAAATGTGGTGGCCTCCCGATTGCTGCTAAAACAATGGGAGGTCTTTTGCGTTCAAAAGTGGATGCAAGGGAATGGAATAAAATTCTAAATAGCAACCAGTGGAATATACCAAATGATGATGTTATGCCTGCATTGCGTTTGAGTTATCTATATCTTCCATCACATTTGAAGAAATGTTTTGCTTATTGCTCGATTTTCCCAAAAGATGTTGTGCTAGAGAAAAGGAAATTGGCCTTGTTATGGATGGCTGAAGGCATTGTACAGCAACAATCCCATGGGGACAAGACATTTGAGATTGAAGCAGAAGACTGTTTCAATGAATTACTATCTAGGTCATTCTTTGAACAATATGGCGGTAATCCAAAAAAGTTTGTCATGCATGATCTCATTAATGATTTAGTGAAATTTGTATCTGGCAAGAGTTGCGTTCAATTTGAGGGAAATGAAGTCCCAAAATCTATACGACATTTATCATTTTCCCTAAAAGAATATAGTTGCTCTAAAGAATGTGAGAGCTTTTGCCATACAAATAGTTTGAGGACTCTTTTGTCGCAAAATGAATTCAAAGATTGGTCACCAATATGTATTTTGTCCAGAAAAGTGCTCCATGATTTGTTGACAAAACTGAAATGTCTAAGAGTATTGTCCTTACCAATGTACAAAAACATTGTTGAGGTACCAATTTCAATTGGTAATTTGCAACTTCTGCGGTATCTCAACCTTTCCCACACTTCAATCAAAAGGTTGCCTGATGTAGCCTTTACACTTTACAACTTGCAGACATTGCTTTTATCAAATTGTATGCATTTTATTGAATTGTCAGAAAAGATAGAAAAGCTTATTAATTTACGTCATCTGGACATTAGCGAAACTGCTTTGAATGAGATGCCCACACAAGTTACAAAACTGGAAAATCTTCAAAATTTGAGTACTTTTATCGTGGGCAAACAGCCGGATGGATTGGGAATTAAAGAGTTGAAAAGGCTCCCTCATCTACAAGGTAAACTTTCCATTTCAAATCTACAAAACGTTGTTGATTCTATGGATGCTTTGGAGGCGAACTTGAAGAATAGAGAAAAGTTTGAGGAACTAGTGTTGGAATGGGATTGTGATACTTCAGATTCACAAATTGTGAAAAGTGTACTCAACGTGTTGCAACCTTCTACAAATGTAAAGAAATTGACCATCAATAATTATGGAGGCACTAGCTTCCCTATTTGGGTGGGAGATTCATCATTTATAAATATCGCCAATTTATGTGTGCGTGATTGCAGTAACTGTGTTTTGCTCCCACCATTTGGAGAACTACCATCTCTCAAAGAGCTCTCGATTAGTGGAATGGGATTAGTGCATACAGTTGGACGTGAATTCTATTGTAGCAAACCTGAGTACTCTTCATTTCAACCATTTCCATCTTTGGAGATTCTCATATTTGTAAATATGCCTACTTGGGAGGAATGGATATTGTTTGATGGTGAAGGTGCCAAATTTCCTTTCCCTCAACTCAAAAGTTTGAGTGTGCATGATTGTCCTATGTTGAGGGGAGACATGCCCCACAACCTTCCATCATTGACAAAGGTTTCTGTAATAAAATGCAAACAATTGGAGGCAAAATCAACAGCTCTGCGGTGGATTCCATGTATCAAGGAATTAAGAATTGAGCAAGGGGAACATGGGTTATTTAGAGCACTTGATGATTTATCTCCGGACTCCTTGGAATCTCTAAGCATTAGGGGGTGTGATAGCTTGCAGTCTTTGCCAAGAATGATAGTGGGTAGCCATTGTCTTCGAAAGTTGTCTCTCCAATATATCCCATCAATAATGTCCTTCCCAATTGATGGTTTGCCTACTTCTTTGCAAGATCTTGAAATTTATAGTTGTGACAAATTAGAGTTCCTACCTCAGGATTCTTGGCAAAACTACACATCACTTGAATACTTGGGAATTGATAATAGTTGTCCTTCCTTGAAATCTTTTCCATTAGGTTGTTTTCCCAAGCTTAAAGAGCTTGATATTGCCAAATGTTGTAATTTGGAGACCTTTACACATGTTGGGAGGTCTGCTCTTCCCTTAGAATCATTTTCGGTCAACAGATGTAACAAACTTAGATCAATGTCAGATGTACACGTTGATTCCCTTGCCAACCTTCAACACTTTAGCCTAACTTTAGTTTCGAAGTTGGAATCATTGCCTCAAGGTGGTTTGCCTTCTAACTTGCGATCACTTATTCTTGGGGGCTGTAATGAACTATCTTCTATACCCATCCAAGACTGGGGGTTTCAACGCCTGACTTCCCTCTCACACCTTGATGTTATGGATAATGAAAGTGAAAGTGATATTATTCTCCATAATTTACAAAAGAATCAATTACTACCCACTTCTCTTGTGACTATCGGCATTGGTGGTGTCTCTAATCTTAAATTGTTAGAAGGAAAAGGGCTTCAACACCTTACTTCTCTTGAAGAGCTTTACTTCTGGAACTGTAAAAACCTTGAATCCTTGCCAGAAGATTCGCTGCCATCCTCTCTTTTGTTGTTGGAAATTGATGGCTGTCCAAAATTAGAAGAGAGATATGATTATGAGAAAGGGAAACACTTGTCCAAGATCGCTCATATTCCCACCATACGAATTAATAGGAAATACTATGATCCTTGA 3747 0.3896 MEFAAKVGEALLSASVQTLLDRISSSEFRDFMKNRKLNVSLLDELKITLLMLGAVLNDAEEKQITRPEVKEWLEELKDAIYDAEDLLDEINTESLRCKVEQDSQNVANKVRSFFSSSFGQFYWGLNSKLEATSRRLEHFAKRKDILGLQSVSFKAHKTPTTSVVNESVVVGREDDKEKLLKMLLCDGDPNPTDVGVVTIWGMGGLGKTTLAQLLYNDKKVQEHFDLKAWACVSDDFNILEVTKNLFESITKKVYDGKNLYLLRVELRNSLSNRRFLIVLDDLWNEKYSDWDDLITPFHNGKRGSKIIVTTRQPRVAEITHTFPVHKLSHLSDDNCWSLISKHAFANVDSNKYPELEAIGRKIARKCGGLPIAAKTMGGLLRSKVDAREWNKILNSNQWNIPNDDVMPALRLSYLYLPSHLKKCFAYCSIFPKDVVLEKRKLALLWMAEGIVQQQSHGDKTFEIEAEDCFNELLSRSFFEQYGGNPKKFVMHDLINDLVKFVSGKSCVQFEGNEVPKSIRHLSFSLKEYSCSKECESFCHTNSLRTLLSQNEFKDWSPICILSRKVLHDLLTKLKCLRVLSLPMYKNIVEVPISIGNLQLLRYLNLSHTSIKRLPDVAFTLYNLQTLLLSNCMHFIELSEKIEKLINLRHLDISETALNEMPTQVTKLENLQNLSTFIVGKQPDGLGIKELKRLPHLQGKLSISNLQNVVDSMDALEANLKNREKFEELVLEWDCDTSDSQIVKSVLNVLQPSTNVKKLTINNYGGTSFPIWVGDSSFINIANLCVRDCSNCVLLPPFGELPSLKELSISGMGLVHTVGREFYCSKPEYSSFQPFPSLEILIFVNMPTWEEWILFDGEGAKFPFPQLKSLSVHDCPMLRGDMPHNLPSLTKVSVIKCKQLEAKSTALRWIPCIKELRIEQGEHGLFRALDDLSPDSLESLSIRGCDSLQSLPRMIVGSHCLRKLSLQYIPSIMSFPIDGLPTSLQDLEIYSCDKLEFLPQDSWQNYTSLEYLGIDNSCPSLKSFPLGCFPKLKELDIAKCCNLETFTHVGRSALPLESFSVNRCNKLRSMSDVHVDSLANLQHFSLTLVSKLESLPQGGLPSNLRSLILGGCNELSSIPIQDWGFQRLTSLSHLDVMDNESESDIILHNLQKNQLLPTSLVTIGIGGVSNLKLLEGKGLQHLTSLEELYFWNCKNLESLPEDSLPSSLLLLEIDGCPKLEERYDYEKGKHLSKIAHIPTIRINRKYYDP 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral680g00004 1248 Pfam NB-ARC domain 172 395 IPR002182 GO:0043531
Pral680g00004 1248 Gene3D - 19 123 - -
Pral680g00004 1248 Gene3D Ribonuclease Inhibitor 560 919 IPR032675 -
Pral680g00004 1248 SUPERFAMILY L domain-like 927 1222 - -
Pral680g00004 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 427 IPR027417 -
Pral680g00004 1248 FunFam Probable disease resistance protein At1g61300 152 321 - -
Pral680g00004 1248 Gene3D - 329 411 IPR042197 -
Pral680g00004 1248 PANTHER DISEASE RESISTANCE PROTEIN RP 43 871 IPR044974 GO:0006952
Pral680g00004 1248 Pfam Rx N-terminal domain 12 104 IPR041118 -
Pral680g00004 1248 Gene3D - 151 322 IPR027417 -
Pral680g00004 1248 Coils Coil 69 93 - -
Pral680g00004 1248 Gene3D - 412 500 IPR036388 -
Pral680g00004 1248 SUPERFAMILY L domain-like 489 915 - -
Pral680g00004 1248 Gene3D Ribonuclease Inhibitor 1088 1232 IPR032675 -
Pral680g00004 1248 PRINTS Disease resistance protein signature 269 283 - -
Pral680g00004 1248 PRINTS Disease resistance protein signature 366 380 - -
Pral680g00004 1248 PRINTS Disease resistance protein signature 618 634 - -
Pral680g00004 1248 PRINTS Disease resistance protein signature 196 211 - -
Pral680g00004 1248 Gene3D Ribonuclease Inhibitor 934 1072 IPR032675 -
Pral680g00004 1248 SMART LRR_typ_2 1181 1205 IPR003591 -
Pral680g00004 1248 SMART LRR_typ_2 597 620 IPR003591 -
Pral680g00004 1248 SMART LRR_typ_2 644 667 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral680g00004 Pral-Chr680 84949 88729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral680g00004 191 383 WRKY Transcription Factor Family AT5G45050 25.871 8.25e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral680g00004 - - pcin:129317775 1392.87