Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral680g00001 ATGTATTCCAATATCACCGAGTTGCCTGATTCAATTGGCAATTTGAAACATCTGCGGTATCTTGATCTATCCTATACTAAAATCACAAGGTTGCCTGATGCCACCTTTAAACTTTGTAATTTGCAGACTTTGCTTTTATCATACTGTAAGTCTTTCAGTGAATTGCCTAAGAGTATAGAAAAGCTTGTCAACCTACGTCACCTGGATATCACCGGCACTGCTTTGAAGGAGATGCCAACACAGATTACCAAACTACAAAATCTTCATAGTTTGAGTACTTTTATGGTGAGCAAACAATCGGATGGATTGAAAAACAAGGAGTTAATAAAGCTACCTCATCTAGAAGGCAAGCTTTCAATTTTGAAGTTACAAAATGTTGTTGATCCCATGGATGCTTTCGAGGCAAAGTTGAAGAGAAGAGAGAAAATTGAGGAGTTAGTGTTGGAGTGGGATAGTGATGATTCTCAAGACTCACCAACAGTGAAAAATATACTCAACATGTTTCATCCTTCAGCAAAGTTACAGAGATTGACCATCAACCGTTATGGTGGTACTAGCTTTCCAAATTGGGTGGGAGATTCTTCATTTACCAATATCACCTTTTTATGCGTGAGCAATTGCAAAGGTTGTTTATCCCTTCCACCTTTTGGGCAATTACCTTCTCTTAAAGAGCTTTCAATTCAAGGAATGGCTTCTGTAAAGCTAGTTGGGCATGAGTTCTATTGCAATCAAGCAGGCTCCTCTTCATTTCATCCATTTCCATCATGGGAAGTTCTAAAATTTGAAGATATGCGGGCTTGGGAGCAATGGAGGATACCATTTAAAGGTGAGGGTATCGAATTTCCCTTTCCTAGTCTCAAACATTTGTACTTGTATAATTGTCCTCAGTTGAAGGGAGACATGCCCGACAATCTTCCATCACTGAGAAAGGTCGATATACTAAACTGCAATCATTTGGAAGCCAAATCATCAGCATTGAAAGGGATTGCTTGCATTCAAAAATTAAACATTAACCAAGGGGAAAAGGACTTGTTGAGGGCCATTGAAAATTTTTCTCTAGACTCATTGAAACGTCTTAGAATTACTGATTGTTCCAGCTTGCAGTCTTAG 1110 0.3874 MYSNITELPDSIGNLKHLRYLDLSYTKITRLPDATFKLCNLQTLLLSYCKSFSELPKSIEKLVNLRHLDITGTALKEMPTQITKLQNLHSLSTFMVSKQSDGLKNKELIKLPHLEGKLSILKLQNVVDPMDAFEAKLKRREKIEELVLEWDSDDSQDSPTVKNILNMFHPSAKLQRLTINRYGGTSFPNWVGDSSFTNITFLCVSNCKGCLSLPPFGQLPSLKELSIQGMASVKLVGHEFYCNQAGSSSFHPFPSWEVLKFEDMRAWEQWRIPFKGEGIEFPFPSLKHLYLYNCPQLKGDMPDNLPSLRKVDILNCNHLEAKSSALKGIACIQKLNINQGEKDLLRAIENFSLDSLKRLRITDCSSLQS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral680g00001 369 ProSiteProfiles Leucine-rich repeat profile. 17 38 IPR001611 GO:0005515
Pral680g00001 369 SUPERFAMILY L domain-like 2 365 - -
Pral680g00001 369 Pfam Leucine rich repeat 3 49 IPR001611 GO:0005515
Pral680g00001 369 SMART LRR_typ_2 62 85 IPR003591 -
Pral680g00001 369 SMART LRR_typ_2 15 38 IPR003591 -
Pral680g00001 369 Gene3D Ribonuclease Inhibitor 1 273 IPR032675 -
Pral680g00001 369 Gene3D Ribonuclease Inhibitor 281 369 IPR032675 -
Pral680g00001 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral680g00001 Pral-Chr680 7039 8148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral680g00001 5 91 WRKY Transcription Factor Family AT4G12020 40.909 1.10e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral680g00001 - - pcin:129317775 463.766