Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral670g00001 ATGGCTCCGCCGCCGGTGGATCACAACGGCGAGTCCACGGCCGGTGACACCCAGAGATCTATCCCAACGCCGTTCCTTTCCAAAACGTATCAGCTCGTCGACGATCACATCATAGACGATGTGATTTCCTGGAACCAAGACGGATCTACTTTCATCGTTTGGAACCCTACCGAATTCGCCAGAGATTTGCTTCCTAAATATTTTAAGCACAACAACTTCTCCAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGAAAGGTTGTGCCTGATCGGTGGGAATTCTCGAACGAGTGTTTCCGCAGAGGCGAGAAACGACTTCTGTGCGAAATACAACGACGGAAGATTTCAACGCCTTCGACGCCGACAACGACGTCCCCGGCAGCGAAGGCCGGAGCCACTGCGACTGTGGCGGTGCCGGGGCCGGTGTCGTTGACTTCTATACCGACGGCGATGCCGATCATCTCGCCATCAACCTCAGACGAGGAGCAGGTGATTTCGTCGAGTTCGCCGTCCTCGAAAGCTCCGGCCGAGCTCATAGACGAGAACGACAGGCTGCGAAAAGAGAACGTGCAGCTGTCGAAGGAATTAGCGGACATGAGATCTCTCTGTAACAATATTTTCTCTCTATTATCTAACTACGCCAACAACCAAATCGATGGCGCTCTGCAAGGAAAAGACACCGTGAAACCGTTGGATTTAATGCCATCGAAACGGAACTCCGGGGAGGAGGAGCCGCCATCGGTGGAAGAGTTAAATCCGAAGCTGTTTGGGGTGGCGATTGGTGCGAAGAGAGCGAGGGAAGCGAGCGGGGGAGCGGAGGAGGAGGACACACTGCTAAGCTTGCATCAGCCGGGGCCAGCGGAGGTGAAATCTGAGCCGTTGGATTGTCAGAACCATCGAGAGAACCAGGAGACGCCGTGGTTCAATCATTGCGACAGAGCAAATAGTGTGTGTAATTAG 963 0.5358 MAPPPVDHNGESTAGDTQRSIPTPFLSKTYQLVDDHIIDDVISWNQDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGEKRLLCEIQRRKISTPSTPTTTSPAAKAGATATVAVPGPVSLTSIPTAMPIISPSTSDEEQVISSSSPSSKAPAELIDENDRLRKENVQLSKELADMRSLCNNIFSLLSNYANNQIDGALQGKDTVKPLDLMPSKRNSGEEEPPSVEELNPKLFGVAIGAKRAREASGGAEEEDTLLSLHQPGPAEVKSEPLDCQNHRENQETPWFNHCDRANSVCN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral670g00001 320 MobiDBLite consensus disorder prediction 156 176 - -
Pral670g00001 320 Gene3D - 17 115 IPR036388 -
Pral670g00001 320 MobiDBLite consensus disorder prediction 1 22 - -
Pral670g00001 320 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Pral670g00001 320 FunFam Heat stress transcription factor B-4 17 115 - -
Pral670g00001 320 Coils Coil 183 203 - -
Pral670g00001 320 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 258 IPR027725 -
Pral670g00001 320 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pral670g00001 320 MobiDBLite consensus disorder prediction 266 294 - -
Pral670g00001 320 MobiDBLite consensus disorder prediction 156 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral670g00001 Pral-Chr670 6175 8000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral670g00001 1 320 HSF AT5G62020 47.941 6.79e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pral670g00001 HSF_DNA-bind 1.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral670g00001 K09419 - gmx:100780987 390.193