Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral668g00002 ATGCTGCACATACGTAAAAGAAAACAGCAAAATGTGATGTTGTGTAAGAAAGGTGGTGATCTTAAACCAAAATGTCAAGCATTTTGTCAGGATGAAGTTCTTAGTATTACCAATAACTTTAAATCAGTAATTGGAGAAGGGGGGTTTGGAAAAGTGTACCTTGGAAAATTACAAGATGGTACACAAGTTGCAGTAAAATTACTTTCTAAGTCATCACAACAAGGATTTAATGAGTTTGAATCAGAGGCAAAATTATTATCCATGGTTTATCATAAGAACTTGCTTTCTCTTGTTGGTTACTGTGACAATGGTGACATAAGAGCATTGATTTATGAATATATGGCAAAGGGAAATCTCCATCACCAATTGTCAGGTAAAAACCCTTATGTTTTAAAGTGGAATGAGAGACTTCAAATAGCATTAGATGCAGCGTGTGGGCTAAACTATCTACACAATTGCTGTAACCCACCAATAATTCATAGAGACCTAAAATCATTTAATATCTTGCTAAGTGAAAACATGCTTGCTAAGATTGCTGATTTTGGACTATGTAAAGCTTTTACAAGTGACACCGACACTCACATTTCAACTCGTCCGGCTGGCACGTTTGGTTACATAGATCCTGAATTTTATAGATTTGGAAACTTGCACAAATCCAGCGATGTTTACAGTTTTGGGATAATTCTACTTGAGTTGATGACGGGTCGATCAGCAATTATGAGAACAGCTGAAGGCAGGAGTCACATTGTTGATTGGATCAGTCCAAAGTTTGAGGCTGGGGATATAGAATCCATTATGGATCCAAAGTTAGAGGGGAACTTCAATATCTCTTCAGCAAGAAAGGTTTTAGAGATAGCCATGTGTTGCATTAAACCAAGTGGTGTGAAAAGACCAGATATAAGTAATGTAGAGAATTATCTAAAGCAATGTTTGGCCTCGGACACATTGCCTGAAGGTGCAGAAAGCAGCAGTTTATTCTCAAGCACCACATTTGATTCCAGTTTTTATCAATGTGGATCATCACACTCACCGCCATTATCTGTCAGGGAAGAATGTTTGTAG 1062 0.3738 MLHIRKRKQQNVMLCKKGGDLKPKCQAFCQDEVLSITNNFKSVIGEGGFGKVYLGKLQDGTQVAVKLLSKSSQQGFNEFESEAKLLSMVYHKNLLSLVGYCDNGDIRALIYEYMAKGNLHHQLSGKNPYVLKWNERLQIALDAACGLNYLHNCCNPPIIHRDLKSFNILLSENMLAKIADFGLCKAFTSDTDTHISTRPAGTFGYIDPEFYRFGNLHKSSDVYSFGIILLELMTGRSAIMRTAEGRSHIVDWISPKFEAGDIESIMDPKLEGNFNISSARKVLEIAMCCIKPSGVKRPDISNVENYLKQCLASDTLPEGAESSSLFSSTTFDSSFYQCGSSHSPPLSVREECL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral668g00002 353 SUPERFAMILY Protein kinase-like (PK-like) 26 307 IPR011009 -
Pral668g00002 353 SMART serkin_6 38 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral668g00002 353 ProSiteProfiles Protein kinase domain profile. 38 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral668g00002 353 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 114 320 - -
Pral668g00002 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Pral668g00002 353 CDD STKc_IRAK 44 309 - -
Pral668g00002 353 Gene3D Phosphorylase Kinase; domain 1 20 113 - -
Pral668g00002 353 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Pral668g00002 353 FunFam receptor-like protein kinase FERONIA 3 113 - -
Pral668g00002 353 Pfam Protein tyrosine and serine/threonine kinase 40 303 IPR001245 GO:0004672|GO:0006468
Pral668g00002 353 Gene3D Transferase(Phosphotransferase) domain 1 114 324 - -
Pral668g00002 353 PANTHER OS07G0107800 PROTEIN-RELATED 13 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral668g00002 Pral-Chr668 7797 9691 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral668g00002 32 312 Receptor kinase-like Gene Family AT1G51880 53.191 4.32e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral668g00002 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral668g00002 - - pcin:129290778 557.755