Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral659g00006 ATGGGTTTCCTTCGGCGAATTTTCGGCGGCAAAAAGCCGGCCTCTCCATCCGAAGGCTCCCACAAGTCCGGCTCTGAACCGGTCAAGAGTAAACGGAGATGGAGATTCATCAAACGCAGCAAAGACAAATCCCAAATGGCTGCGGCGACGGCGGCCGTGGCGGAGGCCGCTCTTGCCGCCGCTCATGCAGCGGCGGAGGTGGTTAGACTCACGAATGGCGGTGGCGGTCCTAGCACAAGCCAGCACCGGTGGCCGGAAGACGTCGCCGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCGTTGGTAAGAGGTCACATCGTAAGAAAGCAAACAGCAGATATGCTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCACGTGCAGGTCGCGTGCAGTTGTCCCATATTCTCCATTCTGCCAAGTCTCCACTCTCTCATCACCCTGTTTCTGAACATTATGGAACCTCACTTAGAGCCAATAGTACTAAATTTGAAGGATCTCCTCTTCTGAAGAGATGCAGTTCCAATGCAAATTTCAGGGACATTGGCTCGGGGAGATCAAGGTTTGTATCGCAATGGTACGACAATTGGATGGAAGAAAATGTGTGGAACCATCCCAGAGGAGATGATGAGAAGAGTGATAAAATTCTCGAAGTTGATACTTGGAAGCCCCGCTTGAACTCCCAGAACGAGAATCCTTTGGCATATGAGTCTCCGTCAAAGCGTTCAACAAGCAGTGTAAACCAAGGTCTCTTCAGTTCCCTCAAGTTTCATCAGAAGAGAAAAGAAGAGAAAGCTTCAAGAACAGCAGAGATGAACAGCAAAGAACTCTCAGCCCATTCATATCAGAACAGTCCAGAGTCATTTTCTGCTTCAAGAAGAAGAACGGGTCCTTTCACCCCCACAAGGAGTGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACCGAGTCATCTCGAGCCAAGTCTAGATCAGTGAGTGCGCCGAGGCAAAGGCTTTGGGATTCTGGAAATAATTCTGATAGGCTTGCTGATTTCAAAAGCCAATGTTCTACATCTTCAAGCCGCTTCAACAGAGTCTTGAGTAGCCATCTAAGGTGA 1164 0.4974 MGFLRRIFGGKKPASPSEGSHKSGSEPVKSKRRWRFIKRSKDKSQMAAATAAVAEAALAAAHAAAEVVRLTNGGGGPSTSQHRWPEDVAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARAGRVQLSHILHSAKSPLSHHPVSEHYGTSLRANSTKFEGSPLLKRCSSNANFRDIGSGRSRFVSQWYDNWMEENVWNHPRGDDEKSDKILEVDTWKPRLNSQNENPLAYESPSKRSTSSVNQGLFSSLKFHQKRKEEKASRTAEMNSKELSAHSYQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKSRSVSAPRQRLWDSGNNSDRLADFKSQCSTSSSRFNRVLSSHLR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral659g00006 387 Gene3D - 86 138 - -
Pral659g00006 387 Pfam Protein of unknown function (DUF4005) 301 376 IPR025064 -
Pral659g00006 387 MobiDBLite consensus disorder prediction 240 324 - -
Pral659g00006 387 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Pral659g00006 387 MobiDBLite consensus disorder prediction 291 318 - -
Pral659g00006 387 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Pral659g00006 387 MobiDBLite consensus disorder prediction 275 290 - -
Pral659g00006 387 PANTHER IQ-DOMAIN 5-RELATED 30 368 - -
Pral659g00006 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 131 IPR027417 -
Pral659g00006 387 MobiDBLite consensus disorder prediction 242 274 - -
Pral659g00006 387 MobiDBLite consensus disorder prediction 1 33 - -
Pral659g00006 387 Pfam IQ calmodulin-binding motif 89 107 IPR000048 GO:0005515
Pral659g00006 387 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Pral659g00006 387 SMART iq_5 85 107 IPR000048 GO:0005515
Pral659g00006 387 SMART iq_5 108 129 IPR000048 GO:0005515
Pral659g00006 387 MobiDBLite consensus disorder prediction 336 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral659g00006 Pral-Chr659 36103 39372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral659g00006 1 356 IQD Protein Family AT5G07240 40.404 4.02e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral659g00006 - - pcin:129293998 589.341