Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral653g00010 ATGGGAAATATTGTTCCTTCTAGTGTCACCCCATCCCTATTATTTTCTCTGTTCTTCTTGTGGTTGATCATGGCAAAGATCGAACAAGTCTCCTCTCTCTCACCTGATGGACAGGCCCTTCTTTCCCTTATATCTTCAGCTGACCCTTCCGCAAAATCCTCCTCTTCTGTTCTCTCTTCATGGAACCCATCAAGCCAAACCCCTTGTTCATGGCATGGCGTCACTTGCTCCCCACAAGGCAGAGTCATTTCATTATCTATTCCAGACACTTTCCTTAACCTTTCCTCTCTGCCTTCCCAGCTTTCTTCTTTATCATATCTGCAACTTCTCAATCTGTCTTCCACTAATATATCTGGCTCCATCCCACCTTCTTTTGGCCAACTCTCCCATCTTCGCCTCCTTGACATCTCTTCAAATTCTCTCACTGGTTCCATTCCTGGAGAACTCGGCAGACTCTCTTCGCTGCAGTTCCTTTACTTGAACTCCAATGGATTGACTGGAAAGATCCCTCAGCAACTTGCTAATCTTACTTCACTTCAAGTTTTCTGCCTTCAAGACAATCTCCTTAACGGGTCAATCCCATCACAATTAGGCTCTTTGACATCTCTACAAGAGTTTCGAATTGGGGGTAATCCCTATCTAAGCGGTGCGATTCCACTACAACTAGGACTACTCACCAATCTCACTACATTTGGGGCCGCAGCCACTGGACTTTCGGGTGTTATTCCGTCTACATTCGGGAACTTGATCAATCTCCAAACGCTAGCACTTTATGATACAGAAATTTCTGGTTCTGTACCACCGGAGCTTGGTTTGTGTTCTGAGCTAAGGAATCTATATTTGCACATGAATAAGCTGACAGGTTCTATCCCACCTCAACTGGGCAAGTTGCAAAAGCTTACTAGCGTGCTTCTCTGGGGCAATGCCTTGACTGGGTCAATCCCTGCTGAGATTTCCAATTGCTCATCACTTGTTGTGTTTGATGCCTCTGCTAATGAACTTTCTGGTGAAATACCACTTGATTTTGGGAAGCTGATGGTTCTAGAACAGCTTCATCTATCAGACAATTCTCTCACAGGGAAAATACCATGGCAACTGAGCAACTGCACTAATCTTGCTACCCTTCAGCTTGACAAGAATCAATTATCAGGTACTATTCCATGGGAAGTTGGGAGATTGAAGTCTTTACAGAGTTTTTTCTTGTGGGGGAATTCAGTGTCTGGAGCCATACCTGCCTCTTTTGGTAACTGTACAGAACTTTATGCACTTGACCTTTCAAGGAACAAGCTAACAGGTTCAATTCCAGATGAAATTTTCGGATTGAAGAAGCTGAGTAAGCTTTTGCTTCTGGGAAATTCCTTATCTGGAGAATTGCCACCAAGCGTTTCAAATTGTGAGTCTCTAGTACGGTTGAGGCTTGGAGAAAATCAGCTTTCAGGACATATACCAAGAGAGATTGGCCAACTGCAGAATCTGGTGTTCCTCGACTTGTACATCAACCATTTCTCTGGAAGCTTGCCAGTGGAGATTGGGAACATCACAGTTCTAGAGCTTCTAGATGTTCATAATAATCACATTACTGGGGATATCCCATCTCAGATTGGGGAGCTTGTAAATTTAGAGCAGCTAGATCTCAGTAGAAACAGTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTAAGTTATTTGAACAAGCTGATTCTCAACAATAATTTAATCACAGGTTCAATTCCAAAATCCATCAGAAAGTTGCAGAAGCTAACTCTATTGGATTTGAGTTACAACAACTTCTCTGGTGACATCCCAACTGAGATTGGTTATGTTACAAGCTTAACTATCAGTTTGGACTTGATCAATGCATTTACAGGAGAAATCCCCGAGTCAATCAGCGGTTTGACACAGTTACAGTCACTTGATCTTTCTTATAATTTGCTCCATGGAGGAATCAAGGTTCTTGGTTCCCTCACCAGTCTCACTTCCCTAAATATCTCCTACAACAACTTCTCCGGTCCTATCCCAGTAACTCCTTTCTTTAGAACCCTATCTTCAAACTCATATTTTGAGAATCCCCATCTTTGTGAATCCCTTGACGGGACCACATGTTCTAGTCTGCTTCGAAAAAATGGTCTAAAATCTGCCAAAACCATAGCCTTGATATCGGTAATTCTTGCCTCAGTTACCATAATTGTCATTGCATCTTGGATTTTGGTGACACGAAACCACAGGAATATGATTGAAAAATCTTTGGGGACATCATCATCTGCTTCAGTAGCTGAGGATTTCTCATATCCTTGGACTTTCATTCCATTTCAAAAACTAAACTTCAACATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGCTCTGGCATTGTATACAGGGCTGAAATGCCTAACGGGGAGTTGATAGCAGTAAAGAAGCTTTGGAAAGCAAACAAAGAGGAAGAAACTGTGGACTCTTTTGCTGCAGAAATTCAGATTCTTGGGCACATCCGGCATAGGAATATTGTGAGGCTCCTAGGTTACTGTTCTAACAGAAGTGTTAAGCTTCTTCTCTATAATTATATTCCAAATGGTAACCTAAGACAGCTATTGCAAGGAAATAGGTACCTAGACTGGGAAACAAGGTACAAGATTGCTGTGGGGTCAGCCCAGGGTCTAGCATACCTTCATCATGACTGTTTGCCAGCAATCCTTCACAGGGATGTGAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAGGCATATCTAGCAGATTTTGGTCTTGCCAAGCTGATGAGTTCACCAAATTATCACCATGCAATGTCCAGAGTCGCTGGATCTTATGGTTATATTGCCCCAGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTGTACAGTTATGGAGTGGTTTTGCTGGAGATACTGAGTGGGCGAAGTGCTGTTGAGTCCCATGTTGGGGGTGGGGTACACATAGTTGAGTGGATCAAGAGGAAGATGGGAAGCTTTGAACCAGCGGTGTCAATTCTAGACACAAAGCTCCAAGGCCTACCAGATCAAATGGTTCAAGAGATGCTTCAAACTCTTGGGATTGCCATGTTCTGTGTGAACTCTTCGCCGGCTGAACGACCCACAATGAAGGAAGTGGTGGCTCTGCTAATGGAGGTGAAGAGCCCACCGGAGGATGTGGGAAAGACCTCTCAGCCTCTAATAAAACAGTCCTCAACTCAGTGTTAA 3249 0.4306 MGNIVPSSVTPSLLFSLFFLWLIMAKIEQVSSLSPDGQALLSLISSADPSAKSSSSVLSSWNPSSQTPCSWHGVTCSPQGRVISLSIPDTFLNLSSLPSQLSSLSYLQLLNLSSTNISGSIPPSFGQLSHLRLLDISSNSLTGSIPGELGRLSSLQFLYLNSNGLTGKIPQQLANLTSLQVFCLQDNLLNGSIPSQLGSLTSLQEFRIGGNPYLSGAIPLQLGLLTNLTTFGAAATGLSGVIPSTFGNLINLQTLALYDTEISGSVPPELGLCSELRNLYLHMNKLTGSIPPQLGKLQKLTSVLLWGNALTGSIPAEISNCSSLVVFDASANELSGEIPLDFGKLMVLEQLHLSDNSLTGKIPWQLSNCTNLATLQLDKNQLSGTIPWEVGRLKSLQSFFLWGNSVSGAIPASFGNCTELYALDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPPSVSNCESLVRLRLGENQLSGHIPREIGQLQNLVFLDLYINHFSGSLPVEIGNITVLELLDVHNNHITGDIPSQIGELVNLEQLDLSRNSLTGEIPWSFGNLSYLNKLILNNNLITGSIPKSIRKLQKLTLLDLSYNNFSGDIPTEIGYVTSLTISLDLSXNAFTGEIPESISGLTQLQSLDLSYNLLHGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYFENPHLCESLDGTTCSSLLRKNGLKSAKTIALISVILASVTIIVIASWILVTRNHRNMIEKSLGTSSSASVAEDFSYPWTFIPFQKLNFNIDNILDCLKDENVIGKGCSGIVYRAEMPNGELIAVKKLWKANKEEETVDSFAAEIQILGHIRHRNIVRLLGYCSNRSVKLLLYNYIPNGNLRQLLQGNRYLDWETRYKIAVGSAQGLAYLHHDCLPAILHRDVKCNNILLDSKFEAYLADFGLAKLMSSPNYHHAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESHVGGGVHIVEWIKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEDVGKTSQPLIKQSSTQC 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral653g00010 1083 SMART LRR_typ_2 634 661 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 585 609 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 393 416 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 249 273 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 128 152 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 417 441 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 537 560 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 465 489 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 297 321 IPR003591 -
Pral653g00010 1083 SMART LRR_typ_2 176 200 IPR003591 -
Pral653g00010 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Pral653g00010 1083 SUPERFAMILY L domain-like 380 709 - -
Pral653g00010 1083 SUPERFAMILY L domain-like 57 407 - -
Pral653g00010 1083 FunFam Putative LRR receptor-like serine/threonine-protein kinase 615 699 - -
Pral653g00010 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 864 1076 - -
Pral653g00010 1083 Pfam Protein kinase domain 788 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral653g00010 1083 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Pral653g00010 1083 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 443 510 - -
Pral653g00010 1083 Pfam Leucine Rich Repeat 348 369 IPR001611 GO:0005515
Pral653g00010 1083 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Pral653g00010 1083 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 511 605 - -
Pral653g00010 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 33 211 - -
Pral653g00010 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 767 863 - -
Pral653g00010 1083 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Pral653g00010 1083 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Pral653g00010 1083 Pfam Leucine rich repeat 615 670 IPR001611 GO:0005515
Pral653g00010 1083 Gene3D Ribonuclease Inhibitor 33 213 IPR032675 -
Pral653g00010 1083 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Pral653g00010 1083 SUPERFAMILY Protein kinase-like (PK-like) 771 1059 IPR011009 -
Pral653g00010 1083 Gene3D Ribonuclease Inhibitor 579 704 IPR032675 -
Pral653g00010 1083 Gene3D Ribonuclease Inhibitor 387 482 IPR032675 -
Pral653g00010 1083 Gene3D Ribonuclease Inhibitor 483 578 IPR032675 -
Pral653g00010 1083 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 308 1058 - -
Pral653g00010 1083 PRINTS Leucine-rich repeat signature 537 550 - -
Pral653g00010 1083 PRINTS Leucine-rich repeat signature 420 433 - -
Pral653g00010 1083 Gene3D Phosphorylase Kinase; domain 1 754 863 - -
Pral653g00010 1083 Gene3D Transferase(Phosphotransferase) domain 1 864 1074 - -
Pral653g00010 1083 ProSiteProfiles Protein kinase domain profile. 786 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral653g00010 1083 Gene3D Ribonuclease Inhibitor 214 386 IPR032675 -
Pral653g00010 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Pral653g00010 1083 SMART serkin_6 786 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral653g00010 Pral-Chr653 113476 117230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral653g00010 32 1077 Receptor kinase-like Gene Family AT5G56040 45.437 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral653g00010 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral653g00010 - - gmx:100819611 1771.13