Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral652g00010 ATGAAACTGAGAGGCTCAGAAATATTTGCGGAAGAGGAAGAAGATGGGGAGAGAGAGTTTGGTGGAGGAACATATATAAAGAAAGGACCATGGAGTGCTGAAGAAGATGAGATTCTGATGAAACATGTCAAGAAAAACGGTCCAAGGGACTGGAGCTCCATTCGATCCAAAGGGTTGCTTCCCCGGACCGGAAAATCCTGCCGGCTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCGGAGGAAGAAAGAGTGGTGATAGAATTGCAGGCACAGTTTGGGAACAAGTGGGCGAAAATAGCGGCTTACTTAGAAGGAAGAACAGACAATGATGTGAAGAATTTCTGGAGCAGTAGGAGAAAGAGGTTGGAGAGAATGTTGCAGAAACCATCTCCATCATCATCATCATCATCAAAGCCACACAATAATAAGAACAAAGCAACATCTCCTATTCATCAGCCACAACCAGTAGTTGAAGAGGTTCCTTCATGCAGTTCAAATCATGTGGAGCAAAACCCATCAGGAAACAAGTTTCTGATGGTTGGTGACACTAAGGAGTTGAAGTTTCAGAATGTGAAAGCAGAGGAAGCCACTCCATTTCACATGGTTCCATCATTTGACTCTTCGTCAGAGTACACTTTTTCTCAGGTACTTCTTCCTGATGACTCCCACCACCAAGTGGATGATGGCCTGGTCTGCCATGGCCTGCTTGATCCGGAGCCGTTTGATGCCGCCTTCCTTGACATTTTCGAGCAGCACAAGAAGCCAGGTCTTGCGTTGGGAGGAATTGCTCAGAGTTCAATTCCACCAAATGGCTTCTTTGAGGACTTCCCAAGTGACATATTTGACTATTTTGAAGACCTTCCGAACTCGTCAGAAAAATGA 906 0.4547 MKLRGSEIFAEEEEDGEREFGGGTYIKKGPWSAEEDEILMKHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAQFGNKWAKIAAYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSSSSSKPHNNKNKATSPIHQPQPVVEEVPSCSSNHVEQNPSGNKFLMVGDTKELKFQNVKAEEATPFHMVPSFDSSSEYTFSQVLLPDDSHHQVDDGLVCHGLLDPEPFDAAFLDIFEQHKKPGLALGGIAQSSIPPNGFFEDFPSDIFDYFEDLPNSSEK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral652g00010 301 Pfam Myb-like DNA-binding domain 31 81 - -
Pral652g00010 301 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Pral652g00010 301 MobiDBLite consensus disorder prediction 135 159 - -
Pral652g00010 301 CDD SANT 84 123 IPR001005 -
Pral652g00010 301 MobiDBLite consensus disorder prediction 130 184 - -
Pral652g00010 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 131 IPR017930 -
Pral652g00010 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 79 IPR017930 -
Pral652g00010 301 ProSiteProfiles Myb-like domain profile. 84 127 IPR001005 -
Pral652g00010 301 SMART sant 81 129 IPR001005 -
Pral652g00010 301 SMART sant 27 77 IPR001005 -
Pral652g00010 301 FunFam Transcription factor GAMYB 83 156 - -
Pral652g00010 301 Gene3D - 83 158 - -
Pral652g00010 301 MobiDBLite consensus disorder prediction 1 21 - -
Pral652g00010 301 Pfam Myb-like DNA-binding domain 84 124 IPR001005 -
Pral652g00010 301 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Pral652g00010 301 Gene3D - 27 80 - -
Pral652g00010 301 CDD SANT 30 75 IPR001005 -
Pral652g00010 301 FunFam MYB transcription factor 28 80 - -
Pral652g00010 301 PANTHER TRANSCRIPTION FACTOR DUO1 22 300 - -
Pral652g00010 301 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral652g00010 Pral-Chr652 50074 51727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral652g00010 26 297 MYB Transcription Factor Family AT3G60460 45.667 1.67e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral652g00010 Myb_DNA-bind_6 6.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral652g00010 K09422 - pcin:129316628 421.394