Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral652g00007 ATGGAGATAGACCTTAAGCAGCCATCAGGAGAATGTCATGATGAAGACAGTTGTAATCCTATTGTTGCTGATTTGGTTGATGAAAACAATAGTAATGAACCCAGAAGTTCTTTAAAAATTGTTGGAAATGATAAGGAGAATGCAGGGCTTGGTATCAATGCTGAATTAGCAAATCATGGAAATGAAGGGTGCACTGGACAAGGAACCAACTTGAATTCTTCAAAATTACCAGAGCACCATGATGGGATGGAATTTCATTCAAAGGAGGAAGCATTTTCATATTATAAAGATTATGCAAAATCTGTGGGATTTACTGCTATAATAAAAGCTAGCCGTCGGTCCCGAATATCTGGAAAATTTATTGATGCAAAGTTTGCATGTACCAAATATGGAAACAAGCAAGAACCCTGTGCAACTGAAACTTCAAATTCTCTTTCAAATATAGATAAGATGCCAAGTATTCCTGTAAAAAGGAAACGGGGTAGAGTGAACTTATCTTGGGTAAAGCCAGATTGCAAGGCCTGCATGCATGTGAAGAGAAGGCAAGACAATCGATGA 558 0.3781 MEIDLKQPSGECHDEDSCNPIVADLVDENNSNEPRSSLKIVGNDKENAGLGINAELANHGNEGCTGQGTNLNSSKLPEHHDGMEFHSKEEAFSYYKDYAKSVGFTAIIKASRRSRISGKFIDAKFACTKYGNKQEPCATETSNSLSNIDKMPSIPVKRKRGRVNLSWVKPDCKACMHVKRRQDNR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral652g00007 185 Pfam FAR1 DNA-binding domain 93 185 IPR004330 -
Pral652g00007 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral652g00007 Pral-Chr652 32693 34526 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral652g00007 FAR1 2.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral652g00007 - - pcin:129315780 314.694